Snodgrassella communis: PYG29_03705
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Entry
PYG29_03705 CDS
T09364
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scom
Snodgrassella communis
Pathway
scom03030
DNA replication
scom03430
Mismatch repair
scom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PYG29_03705
03430 Mismatch repair
PYG29_03705
03440 Homologous recombination
PYG29_03705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scom03032
]
PYG29_03705
03400 DNA repair and recombination proteins [BR:
scom03400
]
PYG29_03705
Enzymes [BR:
scom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PYG29_03705
DNA replication proteins [BR:
scom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PYG29_03705
DNA repair and recombination proteins [BR:
scom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PYG29_03705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
UvrC_M
GIY-YIG_UvrC
Cho_C
GIY-YIG
RNase_H_2
DUF5399
KH_DUF2096_C
Motif
Other DBs
NCBI-ProteinID:
WMY92477
LinkDB
All DBs
Position
complement(797497..798894)
Genome browser
AA seq
465 aa
AA seq
DB search
MLSDQQLAFVDIETTGGRTTSDRITEIAVVYTEAGQQQPQVFHTLLNPNTSIPPFIQALT
GISNQMVEQAPHFNDEIADQLSAIFKGRIFAAHNVRFDYGFIKAAFKRLGRTFNPQQLCT
VKLSRQLYPEHKHHGLDKIIARHNIDMHNRHRAFADARAIYDFWQQLKHNFPADILHQAC
KTIMQRPSLPTHLNNDILKNISDDYGVYLIYGDNDLPLYIGKSKQVKTRLLSHFGQDVHN
SKEMSLSQQAKKIDVIPCSGELDALLTESAQIKQRQPILNRRLRRQKDLFSFQISTNTHG
YDTLNIVPMHHVQFNQQQRYYGLFHSKSDAQKAIKSIISNTDLCLQTLGIEKGSSNRPCF
RHQLHQCSGACINKITATTHNLKLALALQKIKLADWPFTSYAYIKEQQKYHIFHQWIYLG
SASNNDQLHTILSQPQGQLDRDIYQIIQQHKHRLQALNPTHVCPD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgttatcagatcaacaacttgcttttgtcgatatcgaaactaccggtggccgtactacc
agcgatcgcattaccgaaatcgccgtcgtctacaccgaagctggccagcaacagccacag
gttttccacaccctgctaaaccccaataccagcattccacctttcattcaggctcttacc
ggcatcagcaaccaaatggtagaacaggcaccacatttcaacgacgaaattgccgatcag
ctcagtgccattttcaaagggcgtatcttcgccgcccacaacgtacgctttgattacggc
ttcatcaaagccgccttcaaacgtctgggcagaaccttcaacccgcaacaactatgtacc
gtcaaactgtcacgtcagctttaccctgaacacaaacatcatgggctggacaaaatcatt
gcccgtcacaacatcgacatgcacaaccgccaccgcgcctttgccgatgcacgcgccatc
tacgacttctggcagcaactcaaacacaactttccagccgacatactgcatcaggcttgc
aaaaccatcatgcaacgccccagcctgcccacccaccttaacaacgatatcctgaaaaac
atcagtgacgattacggcgtgtacctcatatacggcgataacgacctccccttatatatc
ggcaaaagcaaacaagttaaaacccgcctgctgagccatttcggtcaggatgtacacaac
agcaaagaaatgagcctgtcacagcaggccaaaaaaatagacgtaatcccttgcagtggc
gaactggatgccctgctcaccgaatctgcacaaatcaaacagcgccagcctatcctcaac
cgtcgcctgcgccgtcagaaagacctgttcagcttccagatcagtaccaacacacacggc
tacgacaccttgaacatcgtgcccatgcatcacgtccagttcaaccagcaacagcgctac
tacggcctgtttcacagcaaaagcgatgcccagaaagccatcaaaagtatcatcagcaac
accgacctgtgtctgcaaacccttggtatcgaaaaaggcagcagcaaccgcccctgcttc
cgccaccaattacaccaatgcagcggcgcttgcatcaacaaaattactgccaccacccat
aacctcaaactggcactggccttacaaaaaatcaaactggccgattggccatttaccagc
tatgcctacatcaaagaacagcaaaaataccatatcttccatcaatggatttatctgggt
agcgccagtaacaacgaccaactgcacaccatcctcagccagccacaaggccagctcgat
cgagacatttatcaaatcatccagcagcacaaacaccgcctgcaagccctgaatcccact
catgtttgccctgattga
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