Snodgrassella communis: PYG29_04015
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Entry
PYG29_04015 CDS
T09364
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
scom
Snodgrassella communis
Pathway
scom00300
Lysine biosynthesis
scom00550
Peptidoglycan biosynthesis
scom01100
Metabolic pathways
scom01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PYG29_04015 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PYG29_04015 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PYG29_04015 (murF)
Enzymes [BR:
scom01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PYG29_04015 (murF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WMY92534
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Position
860374..861732
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AA seq
452 aa
AA seq
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MLNLDLDFIYQTFGQVLSVANQPVTRVVIDSRQIQPGDVFVAIQGERFDGHDFIDEVLAQ
GARLCIVNRDDCQNKAHCLVVADTEKALGQLAHAWRMVVNPALQVFGITGSAGKTTVKEM
LAVILRHHAGNEAVLATTGNFNNHIGLPLTLLQLQPQHRYAVIEMGMNHAGELGYLTSLA
CPDYALVNNALRAHIGCGFADVADIARAKSEIYEGLSADGIGFVPADDSQSAICIAALHD
KRYICFGTEQGDVHAENIVLQPLGICFDLHSPQGVINLQVPVPGLHMVHNAVAACALALA
AGLSLTALRGLNEFENAKGRLQQKRSVHGALVIDDTYNANPDAFKAAIDVLAAFPAPRII
VMGAIGELGSNAPALHAEVGAYIRKRGIEAAFFIGDNCQYAAEAYGVAEAFYHDRSWLID
DLRAWDQQTATILVKGSRFMHMEDVVQALTQE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatttagatctggattttatttatcaaacttttggacaggtgttgtctgtcgct
aatcagccagtaacgcgggtggttattgacagccgccagattcagccgggcgatgtgttt
gttgcgattcagggtgaacgctttgatggtcatgatttcattgatgaagtattggctcag
ggtgctcggttatgtattgtcaaccgggatgactgtcaaaataaggcgcattgtctggta
gtagcagatacagagaaggcattagggcagctagctcatgcttggcgaatggtggttaat
ccggcattgcaggtttttggtattactggttcggccggtaaaaccactgtaaaggaaatg
ctggcggttattttgcgtcatcatgccggcaacgaagccgttctggccactacaggcaat
ttcaataatcatattggtttaccattaacgttgttgcagctacagccacaacaccgctat
gcggtaattgaaatgggtatgaatcatgccggtgaactgggttatttaaccagtctggcc
tgtccggactatgcgctggttaataatgctttgcgtgctcatatcggctgtggttttgca
gatgtggctgatattgcccgtgctaaaagcgaaatttatgaggggttgagtgcggacgga
attggctttgttcctgctgatgatagccagtcagctatttgcattgctgctttacatgat
aagcgttatatctgctttggtacggagcagggtgatgtgcatgctgaaaatattgtcttg
cagcctttaggtatctgttttgatttgcatagcccgcaaggggtaattaatttacaggtg
ccggtgccgggattgcatatggtgcacaatgctgtggctgcctgtgcactggcgctggca
gccggtttgtctttgacggccttgcgcggactcaatgagtttgaaaatgctaagggtcga
ttgcaacagaaacgcagtgttcatggtgctcttgtgattgatgatacttataatgccaat
ccggatgcgttcaaggctgctattgatgttctggctgcatttccggcgccaaggattatt
gttatgggtgcaattggtgaactgggcagtaatgctcctgctttgcatgctgaagtcggt
gcttatatcagaaagcgcggcatagaggctgctttttttatcggtgacaattgtcagtat
gcggcagaagcttatggcgttgcagaagcgttttatcatgacagaagctggctgattgat
gatttacgtgcatgggatcagcagacggctactattttggtgaaaggttcacgttttatg
catatggaagatgtggtacaggcattgacgcaagaataa
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