Snodgrassella communis: PYG29_04970
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Entry
PYG29_04970 CDS
T09364
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
scom
Snodgrassella communis
Pathway
scom00010
Glycolysis / Gluconeogenesis
scom00020
Citrate cycle (TCA cycle)
scom00260
Glycine, serine and threonine metabolism
scom00280
Valine, leucine and isoleucine degradation
scom00310
Lysine degradation
scom00380
Tryptophan metabolism
scom00620
Pyruvate metabolism
scom00630
Glyoxylate and dicarboxylate metabolism
scom00640
Propanoate metabolism
scom00670
One carbon pool by folate
scom00785
Lipoic acid metabolism
scom01100
Metabolic pathways
scom01110
Biosynthesis of secondary metabolites
scom01120
Microbial metabolism in diverse environments
scom01200
Carbon metabolism
scom01210
2-Oxocarboxylic acid metabolism
scom01240
Biosynthesis of cofactors
Module
scom_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scom_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scom_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PYG29_04970 (lpdA)
00020 Citrate cycle (TCA cycle)
PYG29_04970 (lpdA)
00620 Pyruvate metabolism
PYG29_04970 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
PYG29_04970 (lpdA)
00640 Propanoate metabolism
PYG29_04970 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PYG29_04970 (lpdA)
00280 Valine, leucine and isoleucine degradation
PYG29_04970 (lpdA)
00310 Lysine degradation
PYG29_04970 (lpdA)
00380 Tryptophan metabolism
PYG29_04970 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PYG29_04970 (lpdA)
00670 One carbon pool by folate
PYG29_04970 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scom04147
]
PYG29_04970 (lpdA)
Enzymes [BR:
scom01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PYG29_04970 (lpdA)
Exosome [BR:
scom04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PYG29_04970 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
Thi4
NAD_binding_8
FAD_binding_2
Biotin_lipoyl_2
FAD_binding_3
HI0933_like
DAO
GCV_H
PYNP_C
HlyD_3
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
WMY92703
LinkDB
All DBs
Position
1080226..1081980
Genome browser
AA seq
584 aa
AA seq
DB search
MSLIELKVPDIGNYQNVDIIAVEIKPGDTVAVDDTLITLETDKATMDVPAEAAGVVKDVK
VKVGDKISEGGVIAVIEASTKAEVSAATATESAPAAAPQAASYSGSSDAEYDVVVLGGGP
GGYSAAFAAADEGLKVAIVERYATLGGVCLNVGCIPSKALLHNAAVIDEVKELKANGIEY
PAPKIDIDQLRSYKEKVVARMTGGLAGMAKTRKVDIIRGNGRYIDPHHIEVKLTSGEGKV
ETGETTTLAFKNTIIAAGSRVVNLPFIPEDFRIVDSTGALALKFVPEKMLIIGGGIIGLE
MGTVYSTLGARLDVVEMMDGLMQGADRDMVRIWQKKNEHRFDNIMLNTKTTAVEAREDGI
YVTFEGAKAPAEPQRYDLVLVAAGRAPNGKLIGAENAGVAVTDRGFINVDKQMRTNVSHI
YAIGDIVGQPMLAHKAVHEAHVAAENCAGHQAYFDARVIPGVAYTNPEVAWVGMTEDQAK
KEGVKINKAVFPWAASGRAVANGCSEGATKLIFDADSGLIIGGAIVGPSAGDMIGEICLA
IEMGCDADDIGRTIHPHPTLGESIGMAAEVAMGTCTDLPPQRKK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaattgaattaaaagtaccggatattggcaattatcaaaatgtcgatattatt
gcagtagaaatcaaaccgggcgataccgttgcggtagatgatacgctgattacgctggaa
acagataaggctactatggatgtaccggctgaggcagccggggtggtgaaagacgttaaa
gttaaagttggcgacaaaatttctgaaggcggtgtgattgcggtgatagaagcttcaacc
aaagcagaagtatccgcagctacggcaacagaaagtgcgccagcagccgcgccacaggcc
gccagttacagtggcagcagtgatgctgaatatgatgtagttgtgcttggtggaggcccg
ggtggctattctgctgcttttgctgcggctgatgaaggattgaaagttgccatcgtagaa
cgttatgctactttgggaggcgtgtgtctgaatgtgggttgtatcccttccaaagctttg
ctgcataatgctgcggtaattgatgaagtcaaagagcttaaagccaatggtatagaatat
ccggcaccgaaaatcgatattgatcagttacgcagctataaggaaaaagttgtagccaga
atgactggtggattggcgggtatggctaaaacccgtaaagtagatattatccgtggtaat
ggccgttatattgacccgcatcacattgaagttaaattgacttcaggtgaaggcaaggtt
gaaactggtgaaacgacaacactggctttcaaaaataccatcattgctgccggtagccgt
gtggttaatttgccatttattcctgaagattttcgaattgtcgattcaactggtgcgctg
gcattgaaatttgtgcctgagaaaatgctgattatcggcggtggcatcatcggtctggaa
atgggtaccgtgtacagtacgctcggcgcacgtctggatgtggttgaaatgatggatggc
ctgatgcaaggtgctgaccgggatatggttagaatttggcagaagaaaaacgaacatcgc
tttgataatattatgctgaataccaaaaccacggctgttgaagccagagaagatggtatt
tatgttacgtttgaaggagccaaggcgccggctgaaccacagcgctatgatttagtactg
gtagcagccggtcgtgcccctaatggtaaactgatcggggctgaaaatgccggtgtagct
gtaactgatcgtggctttattaatgttgacaagcagatgcgtaccaatgtgtcacatata
tatgctattggtgatattgtcggtcagccgatgttagcgcataaagctgtgcatgaagct
catgtggccgcagaaaactgtgccggccatcaggcttactttgatgcgcgcgtgattcca
ggtgtggcttataccaatccggaagtagcatgggtaggcatgacggaagatcaggctaaa
aaagaaggtgtgaaaatcaacaaagcagtatttccgtgggcagcttccggccgtgctgta
gccaatggatgcagtgagggtgctaccaaactgatttttgatgcagacagtggcttgatt
attggtggcgctattgttggcccgagtgctggtgatatgattggcgaaatctgtctggct
attgaaatgggctgtgatgcagacgatattggccgcacaattcatccgcatccgacattg
ggtgaatccataggaatggctgctgaagtggcaatgggtacttgtactgatttgccaccc
cagcgtaaaaaataa
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