Snodgrassella communis: PYG29_06110
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Entry
PYG29_06110 CDS
T09364
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
scom
Snodgrassella communis
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scom03032
]
PYG29_06110
03036 Chromosome and associated proteins [BR:
scom03036
]
PYG29_06110
03400 DNA repair and recombination proteins [BR:
scom03400
]
PYG29_06110
DNA replication proteins [BR:
scom03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PYG29_06110
Chromosome and associated proteins [BR:
scom03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PYG29_06110
DNA repair and recombination proteins [BR:
scom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PYG29_06110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
WMY91025
LinkDB
All DBs
Position
1342551..1342820
Genome browser
AA seq
89 aa
AA seq
DB search
MNKSELIEAIAQEADLSKASAAKALDGMISAVTNALKGGDTVTLVGFGTFYVGERAARAG
RNPKTGEPLEIKAAKTPKFRAGKALKDAL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtctgaattgattgaagctattgcccaagaagctgatttatctaaagcttct
gcagctaaagctctagatggtatgattagcgctgttaccaatgcactgaaaggtggcgat
acggtaactttggtgggttttggtacattttatgtaggtgagcgtgctgcccgtgctgga
cgcaatcctaaaacaggtgagccattagaaatcaaagcagccaaaacacctaagttccgt
gctggtaaagcactgaaagatgctctttga
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