Snodgrassella communis: PYG29_06130
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Entry
PYG29_06130 CDS
T09364
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
scom
Snodgrassella communis
Pathway
scom00020
Citrate cycle (TCA cycle)
scom00480
Glutathione metabolism
scom01100
Metabolic pathways
scom01110
Biosynthesis of secondary metabolites
scom01120
Microbial metabolism in diverse environments
scom01200
Carbon metabolism
scom01210
2-Oxocarboxylic acid metabolism
scom01230
Biosynthesis of amino acids
Module
scom_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scom_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PYG29_06130 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PYG29_06130 (icd)
Enzymes [BR:
scom01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PYG29_06130 (icd)
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Motif
Pfam:
Iso_dh
PrgH
Motif
Other DBs
NCBI-ProteinID:
WMY91029
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Position
complement(1347335..1348573)
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AA seq
412 aa
AA seq
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MSHIKVPTEGHKIVSGQAIPNDPIIPFIEGDGIGVDITPVMKDVIDAAVAKAYNGTRKIV
WMEVYAGEKATKIYGENVWLPEETLEAIKEYKVAIKGPMTTPVGGGIRSLNVAIRQQLDL
YQCVRPVQYFTGVPSPLKDPSKVNMVIFRENTEDIYAGIEWLSETEDAKKVINFLQGEMG
VTKIRFPQTSSIGIKSVSKEGSQRLTRAAIRYAIDNDRDSVTFVHKGNIMKFTEGGFRDW
SYEVAKNEFGATLIGEGPWCEFKNPKTGKNIVIKDCIADAFLQQILLRPAEYDVIATLNL
NGDYISDALAAQVGGIGIAPGANISDEYAVFEATHGTAPKYAGQDKVNPGSIILSAEMML
RHLGWKEAAELVNAAIEKAIADKIVTYDFARMMDGAKEVSCSAFGKALIERM
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacattaaagtgccaacagaaggtcataaaatcgtttccggccaagccatcccg
aatgatcctatcattccctttattgaaggtgatggtatcggtgtagatattacgccagtg
atgaaagacgttattgatgctgcagtagccaaagcttataacggtacgagaaaaatagtc
tggatggaagtctatgctggcgaaaaagccactaaaatttatggtgaaaacgtgtggtta
ccggaagaaacactggaagccatcaaagagtacaaagtagccatcaaagggccgatgact
acacccgttggaggcggaatccgctcactgaacgttgctattcgccagcaacttgattta
tatcagtgtgttcgtcctgtacaatactttaccggtgtgccttcgccactgaaagaccca
agtaaagtgaatatggttattttccgtgaaaataccgaagatatatatgcaggtattgaa
tggctgtctgaaacagaagatgctaaaaaggtaattaatttcctgcagggtgaaatgggc
gttaccaaaatccgtttcccgcaaacttccagcattgggatcaaatctgtgtctaaagaa
ggctcacagcgcctgactcgtgcagccatacgttatgctattgataatgaccgtgacagt
gttacctttgttcataaaggtaacatcatgaaattcaccgaaggtggttttcgcgactgg
tcgtatgaagtagctaaaaatgaatttggtgcgactttaattggtgaaggtccatggtgc
gaattcaaaaatccgaaaacaggtaaaaacattgtaattaaagattgtattgccgatgct
ttcctacaacagattttattacgtccggcagaatacgatgtaatcgccaccctgaatctg
aatggtgattacatttctgatgcgctggctgcacaagtaggcggtattggtattgcgccg
ggtgctaatatttctgacgaatatgccgtttttgaagccactcatggcacagcacccaaa
tatgccggtcaggataaagtcaatccgggttcaatcattctttctgccgaaatgatgctg
cgtcatttaggttggaaagaagctgccgagttggtgaatgcagctattgaaaaagccatt
gcagataaaatcgttacttatgattttgcccgtatgatggatggcgcaaaagaagtttct
tgttcagctttcggtaaagccttaattgaacgcatgtaa
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