Snodgrassella communis: PYG29_06205
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Entry
PYG29_06205 CDS
T09364
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
scom
Snodgrassella communis
Pathway
scom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PYG29_06205 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scom03400
]
PYG29_06205 (xseA)
Enzymes [BR:
scom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PYG29_06205 (xseA)
DNA repair and recombination proteins [BR:
scom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PYG29_06205 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF2000
DHQ_synthase
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
WMY91044
LinkDB
All DBs
Position
complement(1362523..1363875)
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AA seq
450 aa
AA seq
DB search
MSDFFAPAALSVSELNACARQLLEQNLVGLWIGGEVSNLTRAASGHYYFSLKDARAQVRC
VLFKGVAQQLSQPLQEGDDLEVSGKISIYEARGEFQITINAVRHKGLGQLYEAYERLKQQ
LTAEGLFSPQRKRQLPPHPKVVGVVTSLAAAALRDVVTTLRRRHSGISVIVYPTAVQGAG
SEQQIAAAIATANEHAQADVLIICRGGGSIEDLWSYNEEIVVRAVAESAIPSVSGVGHET
DFTLTDFAADVRAPTPTAAAELVSPDMVQLRHTVAQWQTRICQLLQQRYYDASQKLDWLA
RQLKHPQQNWQQQQQQLSDLQRQLQLNMQRQLRQQQQNLIQQQRNLNSLRPQTTHAQQAL
AYREQQLRQFWQNILLRAQQRLQQQGSVLEAVSPLQILARGYSVVTNQRGHIINDGSKLK
TGQYLNIRFATGERRVQVAPAKIQSDLFDN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttctttgctccagctgcattaagcgtctctgaactcaatgcatgtgcccgg
caattactcgaacagaatctggttggtttatggattggcggcgaagtctccaatcttacc
cgtgccgccagcggacactattatttctctttaaaagatgcccgcgcacaggttcgatgt
gtactgtttaaaggcgtggcacaacaacttagccagcccttacaggaaggcgatgacctt
gaagtatctggaaaaatcagcatttatgaggctcgtggtgaatttcagatcaccatcaat
gccgtccggcataaaggtttggggcaattatacgaagcttatgaacgactgaaacaacaa
ttaactgcggaaggtttattctctcctcaacgtaaacgccagctaccaccccatccaaaa
gtagtgggcgtagtcaccagtctggccgcagcagctttgcgtgacgtggtaacaacgtta
cgtcgacgtcatagcggcatcagcgtgattgtctatccgactgcggtacagggcgccggc
agtgaacagcagattgcagctgccatagccacagccaacgaacatgcacaggcagatgta
ctgattatctgccgtggtggtggcagtattgaggatttatggtcttacaatgaagaaatc
gtggtacgagccgtagcagaaagtgctatccctagcgttagtggtgttggccatgaaacc
gattttaccctcaccgattttgctgccgatgtgcgcgctcctacccctacagcagccgca
gaactggttagtccagatatggtacaattacggcataccgttgctcaatggcaaacccgc
atttgccaattactgcaacagcgctattacgatgcttcacagaaactcgactggttggcg
cgtcagttaaaacatccgcaacaaaactggcagcaacaacagcagcaactatcagacttg
caacgccaattacaactaaacatgcaacgccagctcagacagcaacaacaaaatctgata
cagcaacagcgcaacttaaacagcttacggccacagactacccatgcgcagcaggcactt
gcttaccgtgaacagcagttacggcaattttggcaaaatattctgctgcgagctcagcag
cgattacaacagcaaggttcagtactggaggctgtttcacctttgcagattctggccaga
ggttacagcgtggtaaccaatcagcgcggacacattattaatgatggcagcaaactgaaa
accggtcagtatcttaatatccgcttcgccacaggtgaacgacgtgtacaagtagctcct
gccaaaatccagtctgatttatttgataattaa
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