Snodgrassella communis: PYG29_06255
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Entry
PYG29_06255 CDS
T09364
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
scom
Snodgrassella communis
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scom03016
]
PYG29_06255 (trmA)
Enzymes [BR:
scom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
PYG29_06255 (trmA)
Transfer RNA biogenesis [BR:
scom03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PYG29_06255 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_25
DREV
Methyltransf_31
Methyltransf_12
Methyltransf_11
Methyltransf_15
Methyltransf_4
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
WMY91052
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Position
1371816..1372907
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AA seq
363 aa
AA seq
DB search
MTTAAYQQQLSDKQLYLEHLFADCAFPPVQVFTSPASHYRMRAEFRIWHDGDECSYAMFT
PGEKASAGNVHKLRNFSVAHENINSLMPKLLDCIHARELLKARLFQVEFLTTLAGDTLVT
LIYHKKLDDGWMHAASKLAAELGVQVLGRSRGQKVVLERDYVIERLNVNQEIFQYKQLEG
GFTQPNAEVCQSMLSWAVNVAQTINTGDLLELYCGNGNFTLPLSRHFRRVLATEVSKTSV
QAARWNIAINQITNIALARLSAEEFTEAYTGVRTFQRLASEHINLADYQFSSVFVDPPRA
GIDQATLELLQKFDNIIYVSCNPVTLHENLQILLTTHEVKRAAMFDQFPFTPHIESGVWL
KKR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgccgcttaccaacaacaattgtctgacaaacaactttatctggaacattta
tttgctgactgcgctttcccgccagtgcaggtttttacttcgcctgcatcgcattaccgg
atgcgcgctgaatttcgcatctggcatgatggggatgagtgcagttatgctatgtttacg
ccgggtgaaaaagccagcgccggcaatgttcacaaattgcgtaatttttctgttgcccat
gaaaatataaattcattgatgcccaagctgttggattgtatacatgccagggagttgtta
aaggcacggctgtttcaggttgagttcttaaccacgctggcaggtgacacgctggtaacg
ctgatttatcacaaaaagctggatgatggctggatgcacgcagccagcaaattggctgcc
gaactgggtgttcaggttttgggacgcagtcgggggcagaaagtggttttggagcgtgat
tatgttattgaacgcttaaatgtaaatcaggagatatttcagtataaacagttggaaggg
ggctttactcaacccaatgcagaagtgtgtcagtctatgctgagttgggctgtgaatgtg
gcgcaaacgattaataccggagacttgctggaactatattgcggtaatggtaattttact
ctgcctctatcacgccattttcgccgagtactggctactgaggtatcaaaaacttctgtg
caggctgcacgctggaatattgcaatcaaccagataactaatattgcgctggctcggctg
tcggctgaggaatttactgaggcttataccggtgtcagaacttttcagcgtctggcaagc
gagcacattaatctggctgattatcagttcagttcggtttttgtcgatcctccgcgagcc
ggtattgatcaggcaacgcttgaattgttacaaaaatttgacaatatcatttatgtgtcc
tgtaatcctgtaactttgcacgaaaacctgcaaatacttctaactacgcatgaagttaag
cgggcggcgatgtttgaccaatttccctttacaccacatattgaatcgggtgtctggtta
aaaaagcgttga
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