Snodgrassella communis: PYG29_06400
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Entry
PYG29_06400 CDS
T09364
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
scom
Snodgrassella communis
Pathway
scom03030
DNA replication
scom03430
Mismatch repair
scom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PYG29_06400 (holA)
03430 Mismatch repair
PYG29_06400 (holA)
03440 Homologous recombination
PYG29_06400 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scom03032
]
PYG29_06400 (holA)
03400 DNA repair and recombination proteins [BR:
scom03400
]
PYG29_06400 (holA)
Enzymes [BR:
scom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PYG29_06400 (holA)
DNA replication proteins [BR:
scom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PYG29_06400 (holA)
DNA repair and recombination proteins [BR:
scom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PYG29_06400 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
WMY91077
LinkDB
All DBs
Position
1404962..1405945
Genome browser
AA seq
327 aa
AA seq
DB search
MSGLSTQPLATAYLIHGEEDLLRLEAIDNIRIAAREQHYDERETVVVETGFDWSSLLASI
QSVGLFADKKLLEIHIPSGKPGKEGAAVLQHLAEQLPENTCLLLILPKLERLQIQSKWFS
SWAKVARVLEAKAVSQTALPQWIRSRLADVKLAIDNDALELFAEKVEGNLLAARQEIDKL
ALIHSAGHVVTLTEAQTAVANVARFDVFQLSTAWMSGDSVRMLRLLDGLAAEGNEPVLLL
WVISEDIRILLRLLAALKQGKAISELRHSLRLWGDRQTLAPQAARRIGVKRLLSALQTCA
HIDRQIKGVEDGDAWTEIKHLFLSLAA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcttatctacccagcctttagccacagcctatttgattcatggtgaagaagat
ctgctgcggctagaggctatcgacaacattcgtatagcagcacgcgaacaacactacgac
gagcgagaaactgtagttgtagagactggtttcgactggtcatctctgctggcttcgata
caatctgttggcttatttgcggataaaaaattattggaaatacatataccctcaggtaaa
ccaggtaaagagggtgcagccgtactacaacatctggcagaacaattgccggaaaatacc
tgcctgcttctaatactacctaaactagaacgtctgcaaattcaaagtaaatggttttcg
agctgggccaaagttgctcgtgtattggaagcaaaagcagttagtcaaaccgctttaccg
caatggatcaggagccgtcttgctgatgttaagttggccatcgacaatgatgctctggag
ttatttgcagaaaaagtggagggcaatcttttagcagcgcgacaggaaattgataaacta
gctcttattcattcagcaggccatgtcgttaccttaactgaagcgcagacagcagtggcc
aatgtggcacgtttcgatgtttttcagttatcaacagcttggatgagtggggactcagtg
cgcatgttgcgcctacttgatggtttagcagcagagggcaatgaacccgtattattattg
tgggttattagcgaagatatacgtatcctgttgcgtttacttgctgcattaaagcagggt
aaagcgatcagtgaattacgccacagtctacgtttatggggcgacaggcaaacactggcg
ccgcaggcagcaagacgcatcggagttaaacgtctactcagtgctttacagacatgtgcg
catatcgaccggcaaattaaaggtgttgaagacggcgacgcatggacagaaattaaacat
ttatttttatctttggcagcttaa
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