Snodgrassella communis: PYG29_06455
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Entry
PYG29_06455 CDS
T09364
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scom
Snodgrassella communis
Pathway
scom03030
DNA replication
scom03410
Base excision repair
scom03420
Nucleotide excision repair
scom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PYG29_06455 (polA)
03410 Base excision repair
PYG29_06455 (polA)
03420 Nucleotide excision repair
PYG29_06455 (polA)
03440 Homologous recombination
PYG29_06455 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scom03032
]
PYG29_06455 (polA)
03400 DNA repair and recombination proteins [BR:
scom03400
]
PYG29_06455 (polA)
Enzymes [BR:
scom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PYG29_06455 (polA)
DNA replication proteins [BR:
scom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PYG29_06455 (polA)
DNA repair and recombination proteins [BR:
scom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PYG29_06455 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PYG29_06455 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
PPP5
Motif
Other DBs
NCBI-ProteinID:
WMY91087
LinkDB
All DBs
Position
complement(1415330..1418119)
Genome browser
AA seq
929 aa
AA seq
DB search
MQKTLLLVDGSSYLYRAFHALAPLTSPTGMPTGALYGVLNMLRRLRLDTPHDYACCVFDA
KGENFRHQLFPEYKANRPPMPEDLRPQAEALPELVKLMGWPVLSINGVEADDVIGTLARS
AQKSSYQVIISTGDKDMAQLVNDQITLVNTMSNEKLDSIGVLEKFGVKPEQIIDYLSLIG
DKVDNVPGVDKCGPKTAVKWLQEYGNLQKIIEHANDIKGKVGENLRIALPNLPLSYQLIT
IKTDIDLQQELPHGLEDLKRHTPSWAELIPHFQKLGFKNWLKEAQTHYHENTTISQPADD
LFAEIETNGDADTKILTNTSAADYLKNIPKQYSAITTVTQLTKLQKQLEIVDTIALDTET
DSLDAMNASLVGISIALEPGKAFYIPVGHSPTAVSEQLPLEMVLNVLKPYLEADKPRKIG
QNIKYDQHILANYSIDLKGIAGDSMLASYIVESHLGHGLDELALRHLNWQTIHYEDLCGK
GAKQISFADVALEDAVNYAAEDADVSLRLEILLRKQMDEAQLKLYHELEIPVENILYIME
RTGVLIDRQELAQQSHELGTQLVTLEEQAYQLAGQPFNLNSPKQLQSILFEKMAIPTSGL
KKTASGGISTNEIVLEKLAADYPLPKLILQTRSLAKLKSTYTDKLPQLINPHTGRVHTTY
AQAVAITGRLASNNPNLQNIPVRTEEGRRIRRSFIAPPDQLIVSADYSQIELRIMAHLSN
DATLIDAFQKNEDIHKRTAAEIFASSQELITAEQRRYAKTINFGLIYGMSEYGLAKSLGI
ELQAAQHFISRYFSRYPGVHEYMEKTKELALQHGFVETLFGRRLYLPDLKSSNGAVRAGA
FRAAINAPMQGTASDLIKRAMIAVQSWLEQKKMQTKLIMQVHDELVLQVPKSELATLQAH
LPELMSGVAQLKVPLIADLGTGYNWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaacattattactggttgacggctcatcatatttatatcgagcattccatgct
ttagcgccattgaccagtccaactggtatgcctacaggtgcattatatggtgtactaaac
atgttaaggcgtttacgtctggatacaccgcacgattatgcttgttgcgtatttgatgct
aagggtgaaaatttccggcatcagctttttccagaatataaggctaaccgtccgccaatg
ccagaagatctacgtccgcaggctgaggctttgccagaattagtaaagttaatgggttgg
cctgttttatccataaatggtgtagaagcagatgatgtaattggcacgctagcccgttct
gcacaaaaatccagctatcaggttattatttcaaccggtgataaagacatggctcaactg
gttaatgatcagattactctagtgaataccatgagtaatgaaaagcttgatagtattggt
gttttagaaaaattcggggtcaaacctgagcaaataattgattaccttagtctgattgga
gacaaagtcgataatgtaccaggtgttgataaatgtggtcccaaaactgcggtcaaatgg
ttacaggaatatggtaatttgcaaaaaattattgagcatgctaatgatattaaaggaaaa
gttggtgaaaatctacgtattgcattaccaaatttaccgttatcctatcaattgattacc
atcaaaacagatattgatttgcagcaggaattgccacatggtcttgaagatctcaagcgg
catacaccttcatgggctgaattgattccgcatttccagaaacttggttttaaaaactgg
ttaaaggaagcacagactcattatcatgagaatacaactatttcgcagccagctgatgac
ttatttgccgaaattgaaacgaatggagatgccgatactaaaattttaacaaatacatcg
gcagcagattatttaaagaatatccctaagcaatattcagcgattactacagtcacacaa
ctgactaaattacagaaacaattagaaatagtagacaccattgctctggacacagagaca
gatagtctggatgcgatgaatgccagtctcgttggtatcagtattgctttagagccagga
aaagcattctacattcctgttggtcacagccctactgcagttagtgaacaattaccactc
gaaatggttctgaatgttcttaaaccttatttagaagctgataaaccgcgcaaaattggc
cagaatatcaaatatgatcaacatatattggcaaattatagtattgatttaaaaggtatt
gccggtgactccatgctagcttcttatattgttgaaagtcatctggggcatggtttagat
gaattggctctacggcatcttaactggcaaaccattcattatgaagatttatgtggtaaa
ggagccaaacaaatcagttttgctgatgtagcactggaagatgccgtcaattacgctgct
gaagatgcagatgtatctttacgtcttgagattttacttagaaaacagatggatgaagct
cagcttaagctttaccatgaactggaaattcctgttgaaaacatattatatattatggag
cgaacaggagtattaattgatcgccaggaactggctcagcaaagtcatgagcttggtacg
cagctggttacgcttgaggaacaggcttaccaactggccgggcaaccttttaatttgaac
tccccgaaacaactgcaatccatactgtttgaaaagatggccatccctacttccggcctg
aaaaaaaccgcctcaggtggtatttcaaccaatgaaatagtattggaaaaactcgcagcc
gattatcccctacccaaacttattttacagacgcgcagtctggctaaacttaaatctact
tatacagataaattacctcaactaatcaatccccacaccggacgtgtgcataccacttat
gctcaggctgtagccattactggacgtcttgccagtaataatccgaatttgcagaatatt
cccgtacgtactgaagaaggacggcgtatacgaagaagctttattgccccgcccgaccag
ctcatagtttcagcagattattctcagattgagttacgcattatggctcatctttccaat
gatgccactttgattgatgcgtttcagaaaaatgaagatattcataagcgtacagcagca
gaaatttttgcaagcagtcaggagctgataaccgcggagcaacgtcgctatgccaaaacc
attaattttggtttaatttatggcatgagtgaatatggcttggccaaatctcttgggatc
gaacttcaggcggctcagcatttcatttcccgctattttagccgttatccgggtgttcat
gaatacatggaaaaaaccaaagaactggcactacagcacggctttgtagaaacacttttt
ggtcgccgcctttatttaccagacttaaaaagtagcaatggtgcagttcgcgcaggcgca
ttcagagcggcaatcaatgcgccaatgcaaggtactgcatcagacttgattaaacgagcc
atgatagccgtacaaagttggctagaacagaaaaaaatgcaaactaaactgattatgcaa
gtgcatgatgaacttgtattacaagtaccaaaatctgaattagcaaccttgcaggctcat
ttaccggaattaatgtctggggtagctcagttaaaagtaccattaattgccgaccttgga
actggatataactgggatgaggctcattaa
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