Snodgrassella communis: PYG29_06595
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Entry
PYG29_06595 CDS
T09364
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
scom
Snodgrassella communis
Pathway
scom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PYG29_06595 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scom03021
]
PYG29_06595 (rho)
03019 Messenger RNA biogenesis [BR:
scom03019
]
PYG29_06595 (rho)
Transcription machinery [BR:
scom03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PYG29_06595 (rho)
Messenger RNA biogenesis [BR:
scom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PYG29_06595 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
NACHT
AAA_25
AAA
Fungal_virus_P2_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WMY91114
LinkDB
All DBs
Position
complement(1443899..1445161)
Genome browser
AA seq
420 aa
AA seq
DB search
MHVSELQNQHVSELLGIAEEFGIENANRLRKQDLVFAIVRIKMKQGEAFTCSGTLEILPD
GFGFLRSMDTSYLAGPDDIYVSPSQIRRFNLHTGDTIEGSVRVPKDNERYFALVRLDKIN
GDNPDVCKHKILFENLTPLFPDRQFVLERDIRSGENLTGRAIDLIAPIGFGQRALLVAPP
KSGKTVMLQNIAHAITANYPNAELLVLLIDERPEEVTEMTRSVRGEVVSSTFDEPATRHV
QVAEMVMEKAKRLVEHKKDVIILLDSITRLARAYNTVIPASGKILTGGIDANALHRPKRF
FGAARNVEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMELHLDRRMAEKRLFPAINI
NRSGTRREELLVSNDHLQKMWLLRKFLHPMDDIEAMEFIIDKLKQSKNNADFFDLMRGSK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtttctgaattacaaaaccaacatgtgtctgaactattgggcatagctgaggag
tttggcattgaaaacgccaatcgtttacgtaaacaagatcttgtttttgcgattgtacga
atcaaaatgaagcagggagaggcgtttacctgttctggtacgctggaaattcttcctgat
ggctttggttttctgcgtagtatggatacatcgtatctggccggtccagatgatatctat
gtcagcccaagccagattcgtcgcttcaatctgcatactggtgatacgattgaaggcagt
gtacgtgtgcctaaggataacgaacgttattttgcactagtacgccttgataaaatcaac
ggtgataacccggatgtgtgcaaacataaaattctgtttgaaaacctgacaccgttattt
ccagatcgccagtttgtgctagagcgggatattcgatctggcgaaaatcttactggccgc
gccattgatttgattgctccgattggttttggtcagcgtgcattactagtggctccgcca
aaatccggtaaaacagtaatgttgcaaaacatcgcccatgcaattaccgctaattatcct
aatgcagaattgcttgtactgttgattgatgaacgtccggaagaagtaaccgaaatgact
cgctcagtgcgtggtgaagtagtttcttctacctttgatgaaccagctacccgccatgta
caagtagcagaaatggtgatggaaaaggccaagcgtttggttgaacataaaaaggatgtc
atcattctgctggattcaattactcgtctggcgcgtgcttataataccgttattcctgct
tctggcaagattcttaccggtggtattgatgccaatgctctgcatcgacccaaacggttt
tttggtgctgcccgtaatgtggaagaaggtggttcattaaccatcatcgctacagctctg
gttgaaactggtagccgtatggatgacgtgatttatgaagaattcaagggcacgggtaat
atggaattgcatctggatcgacgtatggctgaaaaacgtctgtttccggcaatcaatatt
aatcgttctggtacacgtcgtgaagaattgctggtttccaatgaccatctgcaaaaaatg
tggctgctgcgtaaattcctgcatccgatggatgatattgaagcaatggaatttattatt
gataaattgaagcagtctaaaaataatgcagatttttttgatttgatgcgtggcagcaag
tag
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