Snodgrassella communis: PYG29_07095
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Entry
PYG29_07095 CDS
T09364
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
scom
Snodgrassella communis
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scom03032
]
PYG29_07095
03036 Chromosome and associated proteins [BR:
scom03036
]
PYG29_07095
03400 DNA repair and recombination proteins [BR:
scom03400
]
PYG29_07095
DNA replication proteins [BR:
scom03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PYG29_07095
Chromosome and associated proteins [BR:
scom03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PYG29_07095
DNA repair and recombination proteins [BR:
scom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PYG29_07095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WMY91205
LinkDB
All DBs
Position
complement(1556523..1556840)
Genome browser
AA seq
105 aa
AA seq
DB search
MTKSELMIRLAELYTANNDSTVLNAKDVEQSIKILVDTMTRALAKGQRIEIRGFGSFDLN
HRPARIGRNPKTGEKVSVPEKYVPHFKPGKELRERVDKSLPSADK
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttaatgattcgcttggcggaattatatactgctaataatgatagt
actgtattaaacgctaaagatgttgagcaaagtatcaaaattctcgttgataccatgact
cgtgctttagctaaaggccagcgaattgaaattcgtggatttggtagctttgatttgaat
catcgcccagctcgtattggccgtaatcctaaaacaggggaaaaagtatcggtaccagaa
aaatatgtaccgcactttaaacctggtaaggaattacgcgagcgcgttgataaatcactg
ccgtctgcggataaataa
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integrated database retrieval system
