Snodgrassella communis: PYG29_08085
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Entry
PYG29_08085 CDS
T09364
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
scom
Snodgrassella communis
Pathway
scom02010
ABC transporters
scom03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PYG29_08085
03070 Bacterial secretion system
PYG29_08085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scom02000
]
PYG29_08085
02044 Secretion system [BR:
scom02044
]
PYG29_08085
Transporters [BR:
scom02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PYG29_08085
Secretion system [BR:
scom02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PYG29_08085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
ABC_ATPase
AAA_29
AAA_22
SbcC_Walker_B
ABC_membrane_3
AAA_21
AAA_30
DUF87
NB-ARC
Zeta_toxin
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WMY91386
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Position
1782621..1784762
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AA seq
713 aa
AA seq
DB search
MSLPPELSIPAEFEKPSIAVSALVLLAHFHGLAVNPADIMHRYAEQNDLKIEQWLLAAKD
LGLKAKLVKHDIKRLHLLALPALVWRDDGQHFILARIDEDRYLIQDVEAGKPVILNKEEF
AQRYSGQLILVASRASILGQLAKFDFTWFIPAVIKYRRIFVEVLIVSVFIQLFALVTPMF
FQVVMDKVLVHRGFSTLDVITIALLVITIFDVVLGGLRTYIFAHTTSRIDVELGARLFRH
LLSLPLAYFEHRRVGDTVARVRELEQIRNFLTGQALTSVLDLCFSFIFLLVMWFYSGWLT
LVVLVSLPCYAIWSATISPVLRSRLNDKFARNADNQSFLVESVTAIGTIKAMAVEPQMTR
RWDQQLAAYVSSGFRVTRLATIGQQGVQLIQKLVTVVTLWLGAHLVIKGELTVGQLIAFN
MLAGQVAAPVIRLAQLWQDFQQVGISVSRLGDILNTPTENPTSRMALPNIKGQIEFEKIS
FRYRPDGAEILRDLNLRIRSGEILGIVGRSGSGKSTLTKLVQRLYTPERGRVLVDGNDLA
LADPAWLRRQVGVVLQENVLLNQSIRANIALADPGMPLEKIMYAAKMAGAHDFIMELPEG
YDTIVGEQGAGLSGGQRQRIAIARALVGNPRILILDEATSALDYESERAIMQNMQAICRG
RTVLIIAHRLSTVRMADRIIAMDKGMIVEKGTHQELLAKPDGYYRYLYQLQNS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccaccagaactttctatacccgctgaatttgaaaaacccagtattgctgtt
tctgctctggttcttttagcccattttcatggcctagccgttaatcctgcggacattatg
cataggtatgcagaacagaatgatttaaaaattgaacaatggttacttgcagctaaagat
ctgggcttaaaagccaaactagttaagcacgatattaagcgtctgcatctacttgcttta
ccggcattggtatggcgggacgatggtcagcattttattttagccagaatagatgaggat
cgttatctgattcaggatgttgaagcaggaaagccggttattctgaataaagaagagttt
gcacagcgttactctggtcaattgattcttgttgcgtcaagagcatctatacttgggcaa
ctggctaagttcgattttacttggtttattccagcggtaatcaaataccggcgtattttt
gtggaagtattgattgtatctgtctttattcagctttttgcactagtcacgcctatgttt
tttcaggtggtgatggataaagttctggtacaccgcggtttttccactcttgatgttatt
actattgctttgctggtaattactatctttgatgtggttttaggtggattacgcacttat
atttttgctcatactacgtcacgtattgatgtcgaattgggcgcacgattattccgtcat
ctgttaagcctacctctggcctattttgaacaccggcgagtaggcgatacggttgcgcga
gttcgtgagctggaacaaatccgtaactttttaacaggacaggcattaacttcggtactg
gatctctgcttttcttttatctttctgctggtaatgtggttttatagtggctggcttacg
ttagtagttctcgtgtctctgccttgttatgctatctggtctgcaaccattagtccggtt
ctgcgttcgagattaaatgacaaatttgccagaaatgctgataatcagtcatttctggtt
gaatcggtaacagctattggtacgattaaggctatggcggttgagcctcagatgactaga
cgctgggatcagcagctggctgcttatgttagctccggtttccgcgttacccgtcttgct
actattggccagcagggcgtgcagttgattcagaaattggtgacagttgttactttatgg
ctaggtgcccatctggtgattaaaggtgagctgacagtaggccaattaattgcgtttaat
atgcttgcaggccaggttgcagctcctgtgatccgcctagcacagctgtggcaggatttt
cagcaggtgggtatttctgtttcccgtcttggcgatattttaaataccccaacagaaaat
cctacttcacgcatggctttgccaaatattaaaggccagattgaatttgaaaaaatttct
tttcgctatcgtccggatggtgcagaaattctgcgtgatttaaatttgcggattaggtct
ggtgaaattctgggtattgtgggacgttccggttctggtaaatcaactttaactaagctg
gtacaacgcttatatacccctgaacgtggacgagtgctggtagatggcaatgatctggcg
ctggccgatccagcatggctacgccgtcaggttggtgtggttcttcaggaaaatgtgctc
ttgaatcagagtattcgcgccaatattgctcttgctgacccggggatgcctctggaaaaa
attatgtatgcggctaaaatggcaggtgctcatgattttattatggagttgcctgaaggc
tatgacactatagttggtgaacagggtgcaggtctctctggtggacaaagacagcgcatc
gctattgcccgggctttggtaggaaatccgcgaattctgattctggatgaagcaactagt
gcattggattatgaatcggaacgagccattatgcaaaatatgcaggctatttgcagaggc
cgtacggttttgattattgctcatcgcctatctactgttcgtatggccgatcgcattatt
gcgatggacaaaggcatgattgttgaaaaaggaactcatcaggaattgctcgctaagcct
gatggttactatcgttatctatatcagcttcagaatagctaa
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