Snodgrassella communis: PYG29_08545
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Entry
PYG29_08545 CDS
T09364
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scom
Snodgrassella communis
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scom03016
]
PYG29_08545 (truB)
Enzymes [BR:
scom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PYG29_08545 (truB)
Transfer RNA biogenesis [BR:
scom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PYG29_08545 (truB)
Prokaryotic type
PYG29_08545 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WMY92846
LinkDB
All DBs
Position
complement(1903116..1904039)
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AA seq
307 aa
AA seq
DB search
MNTQISRRKRALNGVLLLDKDSGMSSNSALQRARFLYGAAKAGHTGVLDPLATGLLPVCF
GEATKFAQYLLDADKAYIATLQLGVATSTGDTEGEVVATADTSITLEQIQVAIMAFSGEI
SQTPPMYSAIKYQGKPLYEYARAGITIERKSRQVTIYQIDILEFAFPRLVISVRCSKGTY
IRTLAEDMARHMGTVAHLTALRRIATAGFAIEDTYSLAAISSTDEVTRDNWLLPCDVLVQ
HFTAVTLTDKDILQLQHGIAVHSEQNYGTMCPLRIYAANGRFIGLVQYQAASRRLKVLRL
MNTASVD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccagattagccggcgcaaacgcgcccttaacggagtgttgctgctggataag
gacagcggtatgagtagtaacagcgctttacagcgggcacgattcttatatggcgcagct
aaggccggacacaccggtgtactcgatccgctggctacaggcctgttgcctgtgtgtttt
ggcgaagccaccaaatttgctcagtatttactggatgccgacaaagcttatatagccact
ttgcagttaggcgtggctaccagcaccggcgatactgagggtgaagttgtagccactgcg
gataccagcatcacactagaacagatacaggtggcaatcatggcttttagcggtgaaatt
agccaaaccccgcccatgtactctgccatcaaatatcagggtaaaccgctgtatgaatat
gcccgtgccggcatcaccatcgaacgtaaaagccggcaggtgactatttaccagatagat
attctggaatttgcctttcccagactagtaataagtgtgcgttgcagcaaaggaacctat
atccgtactctggccgaagatatggccagacacatgggcacagtagcgcatctgaccgct
ttgcggcgtattgctacggctggttttgcaattgaagatacatattcactggccgccatc
agcagcacagatgaagtaacacgtgataactggctcttaccctgtgatgtgctggtgcaa
cattttactgctgttaccctgacagataaggatattttgcagttacaacatggcatagcc
gtgcattccgagcaaaattatggcacaatgtgccccttgcgtatttatgctgctaatggg
cgttttatcggattagtgcaatatcaggcagccagccggcgcttgaaagtactgcgtctg
atgaataccgcttctgtcgattaa
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