Snodgrassella communis: PYG29_08675
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Entry
PYG29_08675 CDS
T09364
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
scom
Snodgrassella communis
Pathway
scom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PYG29_08675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scom03400
]
PYG29_08675
Enzymes [BR:
scom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PYG29_08675
DNA repair and recombination proteins [BR:
scom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PYG29_08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
CdsD_PD1
Motif
Other DBs
NCBI-ProteinID:
WMY91496
LinkDB
All DBs
Position
1932215..1933063
Genome browser
AA seq
282 aa
AA seq
DB search
MLDSRYLYLHEAMGLGPMWLSQSAHLIIPATAGKNTETDSEATPAHQTVPVSTGKSPSTT
DAHITQPVNRHRAALQQIISQRAPAALPVAQKNTDESSDSSSLNPIADELNISFDTIPST
LPTCTRCNLHQERCTPLPGYGAINARLLVVSSNPAPPDDSSQQLFSGEVGKLLNNMLAAI
NITAEEVFYTSQVKCAPNVSLRISAEHMRACLPYLSAQIQHIRPQAILLLGQIYSQLDQN
TLAQNLHNIPYVISPHPARLLRQSHLKATAWAALKQLRNYLQ
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgctagacagccgctatctctacctacacgaagccatgggactcgggcccatgtggtta
tcacagagtgctcatctgatcattccagcaacagccggaaaaaatacagaaacagacagc
gaagcaacacccgcacaccaaaccgtacccgtcagcacgggcaaatcgccgtctacaact
gatgcccacataacccaaccagtcaaccgtcaccgcgccgccttacaacaaatcatcagc
cagcgcgcgcctgctgccctacctgtagcacaaaaaaacacagacgaaagcagcgacagc
agcagcctaaaccccatcgcagacgaactaaacatcagttttgacaccatacccagcaca
ctgccaacctgtacccgctgcaatctgcatcaggaacgctgcactcccctgcccggttac
ggcgcaatcaacgcacgtctgctggtggtcagctccaatccggcaccaccagacgacagc
agccagcaacttttcagcggagaagtaggcaagctactcaacaacatgctggctgccatc
aatatcacagccgaagaagttttctataccagccaagtcaagtgtgcgcccaacgtcagc
ctgcgcatctcagccgagcacatgcgcgcatgtctgccctacctgagtgcacaaatccag
cacatcagaccacaagctatcctcctactagggcagatatacagccagctcgaccagaac
accctagcacagaacctgcataacatcccatacgtcatatcccctcacccggcacgctta
ctgcgccagagccacctaaaagccacagcatgggcagcactgaaacaattgcgtaactat
ttacaataa
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