Snodgrassella communis: PYG29_09330
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Entry
PYG29_09330 CDS
T09364
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
scom
Snodgrassella communis
Pathway
scom00260
Glycine, serine and threonine metabolism
scom00460
Cyanoamino acid metabolism
scom00630
Glyoxylate and dicarboxylate metabolism
scom00670
One carbon pool by folate
scom00680
Methane metabolism
scom01100
Metabolic pathways
scom01110
Biosynthesis of secondary metabolites
scom01120
Microbial metabolism in diverse environments
scom01200
Carbon metabolism
scom01230
Biosynthesis of amino acids
scom01240
Biosynthesis of cofactors
scom04981
Folate transport and metabolism
Module
scom_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PYG29_09330
09102 Energy metabolism
00680 Methane metabolism
PYG29_09330
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PYG29_09330
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PYG29_09330
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PYG29_09330
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PYG29_09330
Enzymes [BR:
scom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PYG29_09330
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WMY91619
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Position
2067231..2068481
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AA seq
416 aa
AA seq
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MFSKALTIENFDPELASAIARENQRQQDHVELIASENYVSCAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDEVEQLAIDRLKELFGASYVNVQPHSGSQANQAVYASVLQPGDTILGMS
LAHGGHLTHGANVNISGRLYNAITYGLDENEILDYNQVEQLALEHKPKMIVAGASAYALE
IDWARFRAIADKVGAYLFVDMAHYAGLVAGGEYPNPVPFADFVTTTTHKTLRGPRGGVIM
CRSDEHAKALNSAIFPCLQGGPLMHVIAAKAVAFKEALQPEFKQYARQVKANAKVLAETL
IERGLRIVSGRTESHVFLVDLQPKKLTGKTAEAILGQAHITVNKNAIPNDPEKPFVTSGI
RLGTAAITTRGFTETDTRALGHLIADVLDNADNEQVISEVAQKIQEICTRLPVYGK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaaagcattaaccattgaaaatttcgacccggaactggcctcagccattgcc
cgtgaaaatcagcgccagcaagatcacgtggagctgattgcatcagaaaactatgtaagc
tgtgctgtgatggaagctcagggcagccagttaaccaataaatatgccgaaggttatccg
ggcaaacgctattatggtggctgtgaatatgtagatgaagtagaacagttagccattgac
cgcctgaaagaattatttggcgccagctatgtaaatgttcagccccactctggttctcag
gccaatcaggcagtatacgccagcgtactgcaaccgggcgacaccattctgggcatgtca
cttgcccatggtggccatcttactcacggtgccaatgtcaatatttccggccgcctgtat
aacgccatcacctacggtctggatgaaaacgaaatccttgactacaatcaagtggaacaa
ctggcgctggaacataaaccaaaaatgattgttgcaggtgcctctgcctacgcactggaa
atagattgggcacgtttccgcgccattgcagataaagtgggtgcttatctgtttgtggat
atggcacactacgccggactggtagcaggtggcgaatacccaaatcccgtcccttttgct
gattttgtcaccaccactacccataaaaccttgcgtggtccacgcggtggcgtaataatg
tgccggagtgatgaacatgccaaagcactaaactcagccatcttcccttgtttgcagggc
gggccattaatgcatgtcattgccgccaaagcagtagcattcaaagaagcattgcagcct
gaattcaaacaatatgctcgccaagttaaagccaatgccaaagtgctggctgaaacactg
attgagcgcggtttgcgtattgtttccggccgcaccgaaagccatgtgtttctggtggat
ttacaaccgaaaaaacttaccggtaagactgctgaagctattctgggacaggcgcatatc
accgttaacaagaatgctatccctaacgatccagaaaaaccatttgttacctcaggtatt
cgcttgggcaccgcagctattactacccgtggtttcaccgaaaccgatactcgcgcactg
ggacacctgattgccgatgtactggacaatgcagacaatgagcaggtaatctcagaagtt
gctcaaaaaatacaggaaatctgcactcgattacctgtctatggtaaataa
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