Snodgrassella communis: PYG29_09915
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Entry
PYG29_09915 CDS
T09364
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scom
Snodgrassella communis
Pathway
scom03030
DNA replication
scom03430
Mismatch repair
scom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PYG29_09915 (dnaE)
03430 Mismatch repair
PYG29_09915 (dnaE)
03440 Homologous recombination
PYG29_09915 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scom03032
]
PYG29_09915 (dnaE)
03400 DNA repair and recombination proteins [BR:
scom03400
]
PYG29_09915 (dnaE)
Enzymes [BR:
scom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PYG29_09915 (dnaE)
DNA replication proteins [BR:
scom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PYG29_09915 (dnaE)
DNA repair and recombination proteins [BR:
scom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PYG29_09915 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
WMY91727
LinkDB
All DBs
Position
complement(2194086..2197532)
Genome browser
AA seq
1148 aa
AA seq
DB search
MSNNFPYVPLRLHTEFSIEDGIVRIKEAVKRASTLGIPALGISDLMNVFGMVKFYKACRN
AGIKPIMAVDVRVENPEQPDKPFRMMLVVRNHAGYLRLNELLTDAYVGEDRHPHQPLIRQ
HWLAEGDNSGLICLSGAQYGEVGQALLAHKPELAAQVCAKYQQWFGDRFYLEIQRLPERP
EWEAVVAGSVTLAAEQQLPVVATHPVQFMDAEDFQAHEARVCIASGYVLADKRRPHDFVP
SQYFVTPEEMVARFADIPEALANTVGIAQRCNLTLTLGKYYLPLFPTPAGMTLDDLLIHL
SNEGLRERMAFLYPDEAERAQKMPEYQQRLDYELDIIIQMQFPGYFLIVQDFINWAKQNG
CPVGPGRGSGAGSLVAYSLKITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQENRGRVI
QYVRHKYGVPAVSQIVTFGTMSSKSVVRDVGRVLDLPFGLCDRLSKLIPVEANKPLSLTK
AMEAEPQIQQLLREEEAEELMTLALKLEDLTRGLGMHAGGVLMAPGKIADFCPIYQAGGD
DASPVSMFDKDDVEQIGLVKFDFLGLRNLTIIEMTQKFILDTTGKKVDVNHIPLDDAATY
ANIFAKGNTTAVFQFESAGMKKMLVTARPTKFEEIIAFVALYRPGPMDLIPDFIRRMHGE
EKVEYLHPNLEPVLDSTYGVMVYQEQVMQAAQVCGGYTLGGADLLRRAMGKKKVEEMVKH
RAIFEAGAAGKGIDKQTANEIFNYMEKFAGYGFNKSHAAAYALVSYQTAWLKCHYLAEYL
AGTMSSELTNTDQLKIFVDDGIENGITFLPPSINESFYRFTPNNNKQIRYALGAIKGTGE
GAVEAIVRARETGGAFTDLFDFCQRVDRQHLNRRTIEALVRAGAFDELNPNRAQLLANIG
LAMDNAEQVAANANQGGLFDMVEDAIEPLQMEEVAPWSLAVKLAEEKQAMGFYFSGHPFE
PYADKVRALISSKLAALKPSNNKQKVAGFVTAVRYIMGKRGKFAVVQLEDGSAKQEVVVA
GQALEEYGASLKADQVLIMECKVAVDEYNGGDGLRITADDAFTLAEASARYARSLQLQIT
ADTPVSQLAALLQPYREQQAHVPLKFCCQHQQAYGELRADRSWLIRPEAALFDNLYTLLG
DEAVQVSF
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaattttccctatgttccgttacgtctgcatactgagttttcgattgaagac
ggtattgtgcggattaaagaagcagtcaagcgtgccagtactttaggaataccggcgctc
ggcatcagtgatttgatgaatgtatttggcatggtgaagttttataaggcctgccgtaat
gctggtatcaagcctattatggctgtagatgtacgtgtggaaaatccggagcagccagat
aagccttttcgtatgatgctggtggtaaggaatcatgcgggttatctgcgtctgaatgaa
ttgctgacagatgcctatgtaggcgaagaccgccacccgcatcaacctcttattcggcag
cactggctggcagaaggagacaacagtgggttgatttgtttgtcaggcgcacagtatggt
gaggttggacaggctttgctggcgcataaacctgagctggctgcgcaggtctgtgccaaa
tatcagcaatggtttggagaccgcttttatctggaaattcagcgcttgccggaacggccg
gagtgggaggctgtggtagcgggcagtgtgacacttgctgctgagcaacagttaccggtg
gtggctacccatccggtacagtttatggatgcagaagattttcaggcacatgaggcaagg
gtttgtattgccagtggttatgtgctggcagacaagcgtcgtccgcatgattttgtgcct
agtcagtattttgtgacaccagaggaaatggtggcgcgctttgctgatattccagaagca
ctggccaatacggtaggtattgcgcagcgttgtaatctgacgctgactctgggcaaatat
tatctgcctttgtttccgacacctgcgggtatgacgcttgatgatctgctgatacatctg
agtaatgaggggttgcgggagcgcatggcttttctgtatccggatgaagctgagcgggca
caaaaaatgcctgaatatcagcagcgactggattatgagctggacattattattcagatg
cagtttcccggctattttctgattgtgcaggactttattaactgggctaagcaaaatggc
tgtccggttggtcccgggcgtggttccggcgccggttctctggtggcgtactcgttgaaa
attactgatttggatccgttgcgctataacttgctgtttgaacgttttttgaatccagag
cgggtttcgatgccggactttgatattgatttttgtcaggaaaatcgtggccgtgtgatt
cagtatgtccgccataaatatggtgtacctgcggtaagccagattgtaacttttggtacg
atgtcatctaaatctgtggtgcgtgatgttgggcgggtgcttgatttgccgttcggtttg
tgtgaccgtttgtccaagctgataccggtagaagcaaataagcctttgagtctgaccaag
gctatggaagctgagccacagattcagcagttattgcgtgaagaagaagcagaagagctg
atgacgctggcgctgaaattggaagatttaactcgcggtttgggtatgcatgccggcggg
gtgttgatggctcccggaaaaattgccgatttctgcccgatttatcaggcaggaggtgat
gatgcgtctccggtttctatgtttgataaggatgatgttgagcagattggtctggtgaaa
ttcgacttccttgggctgcgcaatttaaccattattgaaatgacgcaaaagtttattctg
gatactactggaaagaaggttgatgtaaatcatattccgctagatgatgcggccacttac
gccaatatttttgccaaaggcaatacgactgcggtattccagtttgagtcggcggggatg
aagaagatgttggtgacagcacgaccgacaaagtttgaggaaattatcgcgtttgtagcc
ttgtatcgcccgggaccgatggatctgattcccgactttatccggcgtatgcacggtgaa
gagaaagtggaatatctgcatcccaatctggaaccggtactggattccacttatggggta
atggtgtatcaggaacaggtgatgcaagctgcccaggtttgcggtggctatacgctgggg
ggcgccgatttactacggcgcgccatgggtaagaaaaaggtggaggaaatggtgaagcac
cgtgccattttcgaagctggtgcggcaggaaaaggtatagataagcaaacggccaacgag
attttcaattatatggaaaaattcgctggttatggtttcaataagtctcatgctgcggct
tatgcgctggtatcttatcagactgcttggcttaaatgtcattatctggctgaatatctg
gccggtacgatgtccagtgagttaaccaataccgatcagttgaaaatctttgttgatgat
ggtattgaaaatggtattactttcctgccacccagtattaatgaatcgttttatcggttt
acaccaaataataataagcagattcgttatgcgctgggtgcgattaaaggtacgggcgag
ggagcggtagaagcgattgtgcgtgctcgtgaaacaggtggtgcgtttactgatctgttt
gatttctgccagcgcgtcgaccgccagcatctgaatcgccgtactatagaagctttagtg
cgagccggtgcatttgatgagttgaatccgaatcgtgctcagttattggccaatattggg
ctggccatggacaacgctgaacaggtggctgccaatgctaatcagggcgggctgtttgat
atggtggaagatgccatagaacctttgcaaatggaagaagtcgctccgtggtcactggca
gtgaagctggcggaggaaaaacaggcgatgggtttctatttttccggtcacccttttgag
ccttacgctgataaggtacgcgcactgataagcagtaaactggcagcacttaagccatcc
aataataagcagaaagtagccggttttgtaactgcggtgcgttatattatgggtaaacgc
ggtaaatttgctgtagtgcaactggaagatggcagcgccaagcaggaagtggtggtagca
gggcaagcgctggaagaatatggagccagtctgaaggccgatcaggtactgattatggaa
tgtaaggttgcggttgatgaatacaatggtggtgatggtttgcgcattactgcggatgat
gcgtttactcttgcagaggccagtgcccgttatgcacgcagtctgcaattacaaatcact
gcggatacacctgtcagtcagctggcggcactgttacaaccttaccgcgagcagcaggca
catgtaccgctgaaattctgctgccagcatcagcaggcgtatggcgaattgcgcgcggat
aggagctggctaatcagacctgaagcggctttattcgataatctgtacacattactgggt
gatgaagcggtacaggtaagtttctga
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