KEGG   Snodgrassella communis: PYG29_10165
Entry
PYG29_10165       CDS       T09364                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
scom  Snodgrassella communis
Pathway
scom02020  Two-component system
Brite
KEGG Orthology (KO) [BR:scom00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PYG29_10165
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:scom02022]
    PYG29_10165
Two-component system [BR:scom02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   PYG29_10165
SSDB
Motif
Pfam: Sigma54_activ_2 Response_reg AAA_lid_14 HTH_8 Sigma54_activat FleQ Mga dnstrm_HI1420 VpsR
Other DBs
NCBI-ProteinID: WMY91769
LinkDB
Position
2247208..2248488
AA seq 426 aa
MRSSDILIVDDEVGIRDLLSEILQDEGYTVTTAENADTARQLRQQTRPAMVLLDIWMPDC
DGITLLKEWAKSGQLTMPVVMMSGHASIDTAIEATKIGALDFLEKPISLQKLLSTVDRAL
KYGQMQAASNLSLDKLGHSPAIKELNQHLDQIAKFSTPVLLTGELGSPFELVARSFHKNA
TPWVEPSKIEQIVDAPIELLQKATGGILYLGDIAQYGKSTQQSIGFILTKADRYNVRIIC
VCSRPIKEMITDPLQDNKLLNTLSPLIVAIPPLRSQLDDMVFLVEQITTELAESQKIPPV
KFTTAALNELRQYDWPGNLEQLRSVVKSLMLTAEHNEIDVNAISTILNQFKYNQPHEIMT
GFNFDLPLRELREDLERRYFEYHIAQEGHNMSKVAQKVGLERTHLYRKLKQLGIQFSRRQ
AENKSC
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgcgaagcagtgatattttaattgttgacgatgaagtaggaatccgcgatttattatca
gaaattctgcaagacgaagggtataccgtcaccacggccgagaatgccgatactgcccgc
caactgcgtcaacaaactcgtccagccatggtactgttggacatctggatgccagattgt
gatggcataaccttattaaaagaatgggcaaagtccggccagttaaccatgccggtggtt
atgatgagtggtcatgccagtattgatactgcaatagaagcaaccaaaattggtgctttg
gattttctggaaaaacccatttccctgcaaaaattgctcagtacagtagatcgtgccctg
aaatacggacagatgcaggcggcttccaacttgtcactggataaactcggacatagccca
gctattaaagaattgaatcagcatctggatcagatagccaaattcagcaccccagtatta
ttgaccggagaattgggttctccttttgaactggtagcacgttcattccataaaaacgca
accccttgggtagaaccatcaaaaatagaacagattgtagatgcccccattgaactatta
cagaaagcaaccggtggcatactctatctgggtgatattgctcaatatggcaaaagcacc
cagcaaagtatcggctttatcctaaccaaagcagatcgctacaatgtacgcatcatctgt
gtttgtagcaggccaatcaaggaaatgattaccgatccgctacaagataacaaactgctc
aataccctttcaccattaattgttgccattcctccattacgctcacaactggatgacatg
gtgtttttggtagaacaaattaccaccgaactggcagaaagtcagaaaattccgccagta
aaatttaccacagcagcactcaatgaactgcgtcagtatgactggccgggcaatcttgag
caattgcgtagtgtcgtaaaaagcctgatgctaacagcagaacataatgaaatcgatgtt
aatgccatcagcaccatcctgaaccagtttaaatataatcagccacatgaaatcatgact
ggctttaattttgacctgcctctgcgtgaattacgtgaagatttggaaaggcgctatttc
gaataccatattgctcaggaaggccataacatgagcaaagtagctcaaaaagtaggctta
gagcgaacccatctgtatcgaaaattaaaacagcttggtatccagttttcaagacgtcag
gctgaaaacaaatcctgttaa

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