Streptococcus constellatus subsp. pharyngis C232: SCRE_0200
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Entry
SCRE_0200 CDS
T02833
Name
(GenBank) metallo-beta-lactamase superfamily protein 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
scon
Streptococcus constellatus subsp. pharyngis C232
Pathway
scon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCRE_0200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scon03019
]
SCRE_0200
Messenger RNA biogenesis [BR:
scon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCRE_0200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4453
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AGU72080
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All DBs
Position
complement(186366..188048)
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AA seq
560 aa
AA seq
DB search
MSYTLKPEEVGVFAIGGLGEIGKNTYGIEYKDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVENVDRIKGVLITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLLRDAKL
YEINQNTELQFKHLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVGEPADLH
RMAALGEDGVLALLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRLQ
QAAEAAVKTGRKIAVFGRSMEKAIANGIELGYIKAPKGTFIEPNEIKDYPAGEILIMCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTISEAGVDVIHGK
INNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAMDTGVPKDNIFIMSNG
DVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRRDLSEDGVVLAVATVDFKSKM
ILAGPDILSRGFIYMRESGELIRHSQRILFNAIRIALKNKDASIQSVNGAIVNALRPFLY
ENTEREPIIIPMILTPDEEL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatactttaaaacccgaagaagtcggtgtatttgccattggtggcttaggagaa
attggaaaaaatacctacggaattgaatacaaagatgaaattatcatcgttgacgctggt
atcaaatttcctgaagatgaccttttagggattgattatgttattcctgattattcctat
atcgtagaaaacgttgaccgtatcaaaggtgttctgattactcatggacatgaagaccat
atcggtgggattcctttcctactcaaacaagccaatattccgatttatgcaggaccactc
gctctagcacttatccgcgggaaactagaagaacacggtcttttacgtgatgctaagctc
tatgagatcaatcaaaacactgaacttcaatttaaacatttaaaagcaactttcttccgc
acaacccactctattccagagccgttaggaattgtcattcacacacctcaagggaaaata
gtatgtaccggtgattttaaattcgacttgacccccgttggagagcccgctgatttgcac
cgaatggctgccctcggtgaagatggcgttctagcattgctgtctgactcaaccaatgcg
gaaattccgaccttcacaaactctgaaaaagtcgttggacagtctatcatgaagatcatc
gaaggcattcatggacggattatctttgcctcttttgcctcaaatatcttccgcctccaa
caagctgcggaggctgctgttaaaactgggcgaaaaattgccgtttttggacgctcaatg
gaaaaagccatcgccaatggaattgaacttggctacatcaaggcgcctaaaggtactttc
atcgagccaaatgagattaaagactatcctgccggcgaaatacttatcatgtgtacagga
agccaaggagagccaatggcggctctttcacgcatcgccaatggaacacatcgtcaagta
cagcttcaaccaggtgatacagtgattttctcttctagtcctatcccaggaaatactact
agtgtcaataagcttatcaacaccatttcagaagcaggcgttgacgttatccatggcaaa
atcaataacatccatacatctgggcacggaggtcaacaagagcaaaaactcatgcttcgt
ttgataaaaccgaagtattttatgcccgtccatggtgaataccgtatgcaaaaagtgcat
gcgggacttgcaatggatactggagtgcctaaagacaatatctttatcatgagtaatgga
gatgttctagcgttaactgccaattctgctcgcattgctggaagtttcaacgcacaagat
atttatgtcgatggcaatcgtattggagaaattggtgctgcagtccttcgtgacagacgt
gacctttccgaagatggcgttgtccttgcagtagccactgttgactttaaatcgaagatg
atcttagccggtcctgatattctcagccgtggtttcatctatatgcgggaatcaggtgaa
ctgatccgtcatagccaacgtattcttttcaatgcgatacgtattgcattgaaaaataaa
gatgccagcatccagtctgtcaatggagctattgtaaatgctcttcggccatttttatat
gaaaatacagagcgtgagcctatcattattccaatgattttaacaccagatgaagaactc
tag
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