Streptococcus constellatus subsp. pharyngis C232: SCRE_0689
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Entry
SCRE_0689 CDS
T02833
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
scon
Streptococcus constellatus subsp. pharyngis C232
Pathway
scon03410
Base excision repair
scon03430
Mismatch repair
scon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCRE_0689 (recJ)
03430 Mismatch repair
SCRE_0689 (recJ)
03440 Homologous recombination
SCRE_0689 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scon03400
]
SCRE_0689 (recJ)
DNA repair and recombination proteins [BR:
scon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SCRE_0689 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SCRE_0689 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SCRE_0689 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DsrE
AlaDh_PNT_C
Toprim
Motif
Other DBs
NCBI-ProteinID:
AGU72539
LinkDB
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Position
700918..703152
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AA seq
744 aa
AA seq
DB search
MITSKYDWQIATNFSDEDFIKKAKKLGLETSVANLVYQRGIQTEEALRDFLEPSLDQLYD
PYELHDMDKAVTRIRQAIENDEQILIYGDYDADGMTSASIVKEALEQLGAECQVYLPNRF
TDGYGPNASVYKYFIDNQGISLFITVDNGVAGLEAIELAQSMGVDVIVTDHHSMPEILPD
AYAIVHPEHPEADYPFKHLAGCGVAFKLATALLEEVQVELLDLVAIGTIADMVSLTGENR
ILVKYGLSVLKNTQRIGLQELFKIAGIQSDELNEETVGFQIAPRLNALGRLDDPNPAIEL
LTGFDEEEARDIALMINQKNDERKEMVQHIYDEAKFMIDPKKPVQVLAGKCWNPGVLGIV
AGRLLEELHQPIIVLNIENGLAKGSARSIEAVDIFEALDPHRELFVAFGGHAGAAGMTLE
VSRLEELSQVLEAYIEDNQVDLSTKNELFLDEELALPDLTLETLKNFEKLAPFGMDNKKP
IFYLKDFKVENVRTMGMGNAHLKLKISQASAVLEVVAFGLGELATEFSQTKNLELAVTLS
VNKWNGQTSLQLMLMDARVDGIQLFNIRGKNARLPENVPVLRFSGEIPDLKKSRAVVVYD
LPEHLNQLKAIIQQGNFEAIYFKNEIVQPYYLTGFGTREQFAKLYKTIYQFPEFDIRYKL
KELAAYLKIDSILLIKMIQIFEELGFVTIQDGVMQVNKNAEKKAIESSHIYQELKITVKE
QELMALGTVQEIYDYLIEKDECSN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgattacatcaaaatatgattggcagattgccacaaatttttcagatgaggactttatt
aaaaaagctaaaaaactgggcttggagacttcggtagctaatctagtctaccagagaggt
atccagacagaagaagcattgcgagactttctagagcctagtttggaccagctgtatgat
ccttatgaattgcatgatatggataaggcagtgacgcgcattcgtcaagcgattgaaaat
gatgaacaaatcttgatttatggagattacgatgcggatggaatgacttcagcttccatt
gttaaagaagcgttagagcaacttggagcagagtgtcaggtctatctgcccaatcgattt
acagacggttatggtcctaacgcgagcgtttataagtattttattgataatcagggtatt
tccctcttcattacagtggataatggagttgcaggattggaagctattgaactagctcag
tctatgggagtggatgtgattgtgacggatcaccactctatgccggaaatacttcctgat
gcttatgcaattgttcacccggaacatccagaagctgattatccttttaagcacttagct
ggctgcggcgtggcttttaagctagcaactgcccttttagaggaagttcaagtagagttg
ctggatttagtagctattgggactatcgcagatatggtcagcttgacaggggaaaatcgg
attttggtcaaatatggcttgtctgttttgaaaaacacccagcgcatcggtttgcaggaa
cttttcaaaatagcaggtatacagtctgacgagctgaacgaagaaacagtcggttttcaa
atagcccctagactcaatgctctaggtcgattggatgatcccaatcctgctattgaactt
ctgaccggctttgatgaagaagaagcgcgtgacattgccctgatgattaatcagaaaaat
gacgaacgcaaggagatggtgcagcatatctatgatgaagctaagtttatgattgatcct
aagaagcctgttcaggttctagctggcaagtgttggaatccaggtgttttgggaattgta
gcagggcgacttttagaagagttacatcagccgatcattgtgctgaatattgaaaatggt
ttagccaaaggtagtgctcgcagcattgaagcagttgatatttttgaagctctagatcct
caccgagagttatttgtagcttttggtgggcatgcaggggcagctggcatgacccttgaa
gtcagtcgattagaagaactcagtcaggttttggaggcttatattgaagataatcaagtt
gatttgtcaactaagaatgaactctttttggatgaagaattagctttgccagatctgaca
ttagagaccctcaaaaactttgaaaagttagctcctttcggcatggacaataaaaagcct
attttctatttgaaagattttaaggttgaaaatgtccgcactatggggatggggaatgcg
caccttaagctgaaaatttctcaggctagtgcagttcttgaagtagtggcttttggtcta
ggtgagcttgcgacagaattttcccaaactaaaaatttagagttagcagtgactctgtcg
gtcaacaaatggaatggtcagactagcctccagcttatgctgatggatgcgagggtcgat
ggaattcagctttttaatatccgaggtaaaaatgctcggttgcctgaaaatgttcctgtt
ttacgtttttcaggagaaattcctgatttgaaaaagagcagagcagttgtagtgtatgac
ttacctgagcacctaaatcagctcaaagcaattattcaacagggcaattttgaagcaatt
tactttaaaaatgagattgttcagccctattatttgacaggtttcggaacaagagagcag
tttgctaaactctataaaacgatttatcagtttccagagtttgatatacgctacaaattg
aaagaactagccgcttatctcaaaattgattccatcctactcattaagatgattcaaatt
tttgaagagttaggctttgtgacgattcaagatggggttatgcaggtaaataaaaacgca
gaaaaaaaagctattgaaagtagccatatttatcaggagcttaaaataactgtcaaggag
caggaacttatggctctaggaacggtacaggaaatttatgattatctgatagaaaaagat
gaatgttcaaactag
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