Stenella coeruleoalba (striped dolphin): 307175670
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Entry
307175670 CDS
T11893
Symbol
ACYUVP_000943
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
scoo Stenella coeruleoalba (striped dolphin)
Pathway
scoo03013
Nucleocytoplasmic transport
scoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
307175670 (ACYUVP_000943)
09122 Translation
03013 Nucleocytoplasmic transport
307175670 (ACYUVP_000943)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scoo03019
]
307175670 (ACYUVP_000943)
03041 Spliceosome [BR:
scoo03041
]
307175670 (ACYUVP_000943)
Messenger RNA biogenesis [BR:
scoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
307175670 (ACYUVP_000943)
Spliceosome [BR:
scoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
307175670 (ACYUVP_000943)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
MLKL_N
Motif
Other DBs
NCBI-GeneID:
307175670
NCBI-ProteinID:
XP_079757128
LinkDB
All DBs
Position
1:complement(78764900..78767290)
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AA seq
626 aa
AA seq
DB search
MSSESSKNRKPRVIRSDGAPAEGKHNRSDTEQEGKYYSEEAEVDLWDRRDYELYKYTCQE
LQRLMAEIQDLRSRGDKDAAVEIEDRRIQSCVHFMTLKKLNRGLPWWRTHIRLKKGRDQT
HEAEHKVDDAHHLQLQNLLYEVMHLQKEITKCLEFKSNHEEIDRVSLEEAPPDISKAEVT
MGDPHQQTLARLDWELEQRKRLVEKYRECLSNKEKILKETEVKKEYLSSLQPRLNSIMQA
SLPVQELFMPFDQAHKQYETARHLPPPLYVQATVYGQDKRKEMLKRHPLSVMLDLRCKDD
SELHLTFYYLMNLNIMTVKAKVTTATEAITPISAGDLLSPDSVLSCLYPGDHGKKTPNPA
NQHQFDKVGILTLRDYILDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSASHMETTMK
PLKTRAQSRLARHKWFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHEDYTELHFTK
DIVEAGLAGDTNLYYMALVERGTAKLQAAMVLNPGYSSIPPIFQLCLNWKGEKTNNNDDN
IRAVESEVNVCYKELCGPRPGHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKM
CLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaatcgagcaaaaatcgaaagcccagagtgatccgaagtgatggagctcca
gctgaagggaagcataatcgttctgacactgaacaggaaggtaaatactacagcgaggag
gctgaggtggacctgtgggaccgcagagactatgagctgtacaagtacacgtgccaggag
ttgcagaggctcatggccgagatccaggacctgaggagcaggggagacaaggatgcggca
gttgagatcgaagatcggaggatccagagctgtgtgcatttcatgactctaaaaaagctt
aaccggggccttccctggtggcgcacccacatcaggttgaagaaaggaagagatcagact
catgaggccgagcacaaagtggatgatgcccatcacctgcagctccagaacctgttgtat
gaggtgatgcacctgcagaaggagatcaccaaatgtctggagtttaagtcaaatcacgaa
gaaatcgatcgggtcagcttagaggaggctcctccagatatcagcaaggcggaagtcacc
atgggagaccctcaccagcagacccttgcacgtctggactgggagctggagcagcggaaa
aggctggtggagaagtaccgagagtgcctgtccaacaaggagaagatccttaaggagact
gaagtaaagaaggagtacctgagtagcctccagcctcgtctcaacagcatcatgcaggct
tccctaccggtgcaggagctgtttatgcccttcgaccaagctcacaagcagtatgagaca
gcccgacacctacctcctcccctctatgtccaggccactgtgtatgggcaagacaagcgc
aaggagatgctgaagaggcacccgctgtccgtcatgctggacctgaggtgcaaagatgac
agtgaactgcacctgactttctactacctcatgaacctcaacatcatgacggtaaaagcc
aaagtgacaaccgccacagaagcgatcacccccatcagtgcaggtgacttgctgtctcct
gactcagtcctgagctgtttgtatcctggggatcatggaaagaaaactccaaatccagcc
aatcagcatcagtttgataaagttggcatcctgactttgagggactacatacttgactta
gggcatccctatttgtgggtgcagaagctgggtggcctccacttccccaaagagcagccc
cagcacactgtgatcgctgaccactctctgagcgccagccacatggagaccaccatgaaa
ccgctgaagaccagggcgcagtcccgcctggcccgccacaagtggtttgcctccctggaa
cacggcattgtgccagttaccagtgactgccagtacctcttccctgcaaaggttgtctct
cgcctggtgaagtgggtgacgattgcccatgaggattatacggagctgcattttaccaaa
gacatcgtggaggcgggactggctggggacaccaatctctactatatggcacttgtggaa
aggggcacggctaagctccaggctgccatggtgctgaaccccggctactcctccatccca
cccattttccagctctgtctgaactggaaaggggagaaaaccaacaacaacgacgacaat
attcgggccgtggagagtgaggtcaatgtgtgctacaaggagctgtgcggcccccggccc
ggccaccagctcttgacgaaccagctgcagcgtctgtgtgtgctgctggacgtctacctg
gagacggagagccacgatgacagcgtggaggggcccaaggaatttccccaggagaaaatg
tgtctgcggcttttcaggggccccagcaggatgaagccgtttaaatataaccaccctcaa
ggattcttcagccatcgctga
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