KEGG   Stenella coeruleoalba (striped dolphin): 307176451
Entry
307176451         CDS       T11893                                 
Symbol
COL4A2, ACYUVP_001724
Name
(RefSeq) collagen alpha-2(IV) chain isoform 1
  KO
K06237  collagen type IV alpha
Organism
scoo  Stenella coeruleoalba (striped dolphin)
Pathway
scoo04151  PI3K-Akt signaling pathway
scoo04382  Cornified envelope formation
scoo04510  Focal adhesion
scoo04512  ECM-receptor interaction
scoo04518  Integrin signaling
scoo04820  Cytoskeleton in muscle cells
scoo04926  Relaxin signaling pathway
scoo04933  AGE-RAGE signaling pathway in diabetic complications
scoo04974  Protein digestion and absorption
scoo05146  Amoebiasis
scoo05165  Human papillomavirus infection
scoo05200  Pathways in cancer
scoo05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:scoo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    307176451 (COL4A2)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    307176451 (COL4A2)
   04518 Integrin signaling
    307176451 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    307176451 (COL4A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    307176451 (COL4A2)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    307176451 (COL4A2)
  09154 Digestive system
   04974 Protein digestion and absorption
    307176451 (COL4A2)
  09158 Development and regeneration
   04382 Cornified envelope formation
    307176451 (COL4A2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    307176451 (COL4A2)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    307176451 (COL4A2)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    307176451 (COL4A2)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    307176451 (COL4A2)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    307176451 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scoo04147]
    307176451 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:scoo00536]
    307176451 (COL4A2)
Exosome [BR:scoo04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   307176451 (COL4A2)
Glycosaminoglycan binding proteins [BR:scoo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   307176451 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 307176451
NCBI-ProteinID: XP_079758685
LinkDB
Position
18:75568332..75745933
AA seq 1711 aa
MDRDQRAASRPALRRWLLLGAVTVGLLAQGVLAGVKKFDVPCGGRDCSGGCQCYPEKGGW
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGDRGAPGITGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGPPGYDGCNGTVGDAGYPGPSGPGGFLGPRGPQGPKGQKGEPYALSSEDRD
RYRGEAGVPGLVGFQGPPGRPGPVGQMGPVGAPGRAGPPGPPGPKGQPGNRGLGFYGEKG
EKGDMGQQGPGGIPPDNSYVERPKNDVILPEQYKGEKGSEGEPGRKGISMKGEEGIMGFS
GVRGAPGFDGEKGSPGQKGSRGPDGYQGPDGYPGPKGEMGEPGPPGPPAYSPHPSLDKGA
RGDPGFHGAPGDPGARGEPGDLGLPGLPGTSIGDEDEKRGLPGEMGPKGFTGEQGIPALY
PGLPGADGRPGLRGPPGFPGPPGPDGFLFGLKGAEGRVGYPGPSGFPGARGQKGWKGDAG
DCQCAEGDQFIGGLPGPPGPKGFPGTNGEPGRKGSPGDPGQHGIPGFPGFKGAPGGVGLP
GPKGMKGDSRTITTKGERGQPGVPGVPGLKGDSGIPGRDGLDGFPGLPGSPGDGIKGPSG
DAGHPGPPGTKGIPGERGPPGLGLPGPKGERGFPGDAGLPGPPGFPGPPGTPGAPGQIDC
DTGVKRPIGADGQETVQPGCVGGPKGSPGQPGPPGPPGAKGLRGLPGLSGTDGAQGLKGL
PGDPGPEGFPGPPGFVGPRGVKGAVGRPGLDGLPGPSGLPGPVGPPGDRGLPGEVLGAQP
GPRGDTGLPGRSGLKGPPGERGPPGFRGSQGMPGMPGPKGQQGFPGPSGQPGLPGPPGQH
GYPGAPGREGPLGPPGTPGFGGLPGDRGEPGDTGVPGPVGMKGVSGDRGDPGWQGERGHP
GSPGFKGVAGMPGAPGPKGVKGSPGMDGFQGLLGLKGRSGLPGNKGETGFVGVPGLKGLA
GEPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGLPGMPGIPGLSG
VPGLPGKPGYVKGVKGDTGFPGVPGSPGFPGVPGSPGISGFPGFTGSRGDKGAPGRVGLH
GEIGPIGDFGDIGNTIDLPGSPGLKGEGGTAGAPGLKGFFGEKGSEGDVGFPGITGLAGV
QGPPGLKGQTGFPGLTGLQGPQGEPGRAGVPGTKGDYGWPGSPGLPGLPGLRGIGGLHGL
PGTKGFPGSPGADIHGDAGLAGPAGARGDPGEANTLPGPAGPPGRKGERGVPGERGPVGS
PGLQGFPGITPPSNISGLPGDVGAPGIFGLEGYRGPPGPPGPVALPGIKGDEGSPGAPGN
PGTKGWVGDSGPQGRPGVFGLLGEKGPRGEQGFMGNTGAAGSVGDRGPKGPKGDRGLPGA
PGAVGAPGIAGIPQRVAIQRGPVGPQGRRGPPGPQGEMGPQGRPGEPGFRGTPGKAGPQG
RGGVSAVPGFRGDQGPVGLQGPVGYEGEPGRPGSPGLPGMPGRSVSIGHLLVKHSQTEQD
PMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASRN
DKSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWI
GYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTIPE
QSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq 5136 nt   +upstreamnt  +downstreamnt
atggaccgagaccagcgcgcggcgtcgcgccctgccctgcggcggtggctactgctggga
gctgtgacagtggggctcctggcccagggcgtcctggcgggcgtgaagaagttcgatgtg
ccctgtggagggagagactgcagtgggggctgccagtgctatcccgagaaaggaggatgg
ggccagccagggccagtgggcccacagggatacaccgggccccccggcttacaagggttc
ccaggactgcaaggccggaaaggtgacaagggtgataggggggctcccggcatcacagga
ccgaagggagacgtgggagccagaggcgtttctggatttcctggtgccgacggaattccc
ggacatcctggccagggcgggcccagaggaccgcctggctacgacggctgcaacgggaca
gtgggtgacgcaggctacccgggacccagcggccctggcggcttcctcggcccccgtggg
ccccaaggacccaaagggcagaaaggcgagccctacgctctgtctagtgaggaccgcgac
agatacaggggggaagctggagtgcccgggctggtcggtttccaggggcctcccggccgc
cctgggcctgtgggacagatgggtccggttggagctccaggaagagcaggaccccctgga
ccccctggaccaaaaggacagccaggcaacagaggacttggtttttacggagaaaaagga
gaaaagggcgacatgggacagcagggacccggtgggattccaccagacaacagttacgtc
gagaggcccaaaaatgacgtgatcctcccagagcagtataagggtgaaaaaggaagtgag
ggggaaccaggaagaaaaggcatttccatgaagggagaagaaggaatcatgggcttttca
ggagtgcggggtgcccctggcttcgatggtgagaaaggttcaccgggacagaagggaagc
agaggaccggatggttaccaaggccctgatggatacccaggacccaagggagaaatgggt
gaaccaggcccccccggccccccagcctactccccgcatccttccctggacaaaggtgcc
agaggggacccaggattccacggagcccccggggacccaggagcccggggggagcctgga
gacctcggcttgccaggcctgcctggtacatccatcggagatgaagatgagaagagaggc
ttaccaggcgagatgggacccaaaggcttcacaggagagcagggcatccccgccctgtac
cccggcctgccgggagctgacggaaggccagggctccgaggtcccccagggttcccggga
ccacctggcccagacggtttccttttcggccttaaaggagcagagggcagggtgggctac
cctggaccttctggtttccccggggctcgcggacagaaaggatggaaaggcgatgccggc
gactgtcagtgtgcagagggtgaccagttcattgggggtcttccggggccaccaggaccc
aagggctttcccggcaccaatggggaaccagggaggaaaggcagcccgggagaccccggc
cagcacggcatccccgggttcccaggattcaagggagcccctggtggtgttggccttccc
gggcccaaaggaatgaagggagattctcgaaccatcaccaccaaaggtgagcggggccag
ccaggtgtcccaggtgtgcctggactgaaaggggacagcggcatcccagggcgcgacggg
ctggatggattcccaggcctcccaggctctcccggtgatggcatcaaaggcccctcaggg
gacgcaggtcacccaggaccccccggtactaagggcattccaggagaaaggggcccccca
ggattggggctgccaggccccaaaggcgagcgtggcttccccggcgatgctggattacct
ggacctccaggcttccccgggcctcccggcacccccggcgctccaggacaaatagattgc
gatacgggtgtgaaaaggcccatcggagcagacggacaggagaccgtccagccaggttgt
gttggagggcctaagggatcgccgggccagccgggcccccccggccccccaggtgccaaa
ggcctcagagggcttccgggattatcgggaactgacggagcacaagggctcaagggtctc
ccgggagatccaggtccagagggattcccaggacccccaggcttcgtggggcctcgagga
gtcaaaggtgcagtaggccgccctggcctggatggactcccgggtccctccggcctgccg
gggccagtcgggcctccgggagacaggggcctccctggagaagtcttgggggcccagccc
gggcctcggggagacaccggactgcctggacgctctgggctgaagggcccccccggagag
agaggccctcctggattccggggaagccaggggatgccaggaatgccgggcccgaagggt
cagcagggcttcccaggaccttcgggccagccgggactgcccgggccaccaggacagcat
ggctaccctggagctcccggccgggaagggcccttggggccgccgggcaccccaggtttt
ggaggtctgcctggagacagaggggagccaggtgacacaggcgtccctggccccgtgggc
atgaagggcgtctccggggatagaggtgaccctggctggcagggtgagagaggtcatccc
ggaagccctggattcaaaggagtggccgggatgcctggtgccccgggccccaaaggagtt
aagggttctcccgggatggatggcttccaaggcttgctcgggctcaaggggagatccggg
cttccgggaaacaaaggagagactggatttgttggagttcccgggctgaagggcctggct
ggcgagcccggtgtgaaaggcagccgaggggaccccggcccccccggaccacctcccatc
atcctgccaggaatgaaagacatcaaaggagagaaaggagatgaaggccccatgggactg
aaaggatacctgggcttgaaaggccttcccggaatgccagggatccccgggctgtcagga
gtccctgggctgccggggaaaccaggctacgtcaaaggagtcaaaggagataccggattc
cccggcgtgcccgggtcaccaggattccccggcgtgcccggctcccccggaatctcaggg
tttccgggcttcacaggcagtaggggcgacaagggagctccggggagagtaggccttcac
ggcgagatcggccccatcggtgactttggtgatattggaaacactatagaccttccagga
agtccaggcctgaagggggaaggaggcaccgctggagcaccaggtctaaagggattcttt
ggagagaaaggatcagagggtgatgtcggcttccctgggatcaccggcctggcaggagtc
cagggccctcctggacttaaagggcaaacaggctttccaggactgacagggctgcagggg
cctcagggagagccgggacgggcgggagtgcccggcaccaaaggagactacggctggccg
gggagcccaggcctaccaggtctgcccggcctgcgcggcatcggcggattacacggcttg
ccaggcaccaaaggcttcccaggatccccaggtgcggacatccacggggacgccggctta
gcaggtcctgccggggccaggggtgacccaggagaggccaacacccttccaggccccgca
ggacccccgggacggaaaggggagcgtggagtcccaggggaacgaggcccggttgggagc
ccaggacttcaggggtttccaggcatcacccccccttccaacatctctgggttaccaggt
gacgtaggcgcgcctgggatatttggcctggaaggttatcgaggtcccccggggccacct
gggcccgtggctcttcctggaatcaaaggagatgaggggagtccaggagcccccggaaac
ccggggaccaaaggatgggtcggggactccgggccccagggccggcctggcgtgttcggg
ctcctgggagaaaaagggcccagaggagagcaaggattcatgggcaacacaggcgccgcc
gggagtgtgggagaccgaggccccaaaggacccaaaggagatcgaggactcccgggtgcc
ccgggtgctgtgggcgccccggggattgcaggaatcccccagagggttgccatccagcgg
gggccagtgggtccgcagggaaggagaggccctccggggcctcagggggagatgggaccc
cagggccgcccgggagaaccaggtttccgcgggactccagggaaggcagggccccaggga
agaggcggcgtgtcagctgttcccgggttccgaggagaccaggggcccgtggggctgcag
gggcccgttggctacgaaggggagccaggccgccccgggagccccggcctgcccggcatg
cccggccgcagcgtcagcatcggacacctcctggtgaagcacagccagacggagcaggac
cccatgtgccccgtgggcatgaacaagctctggagcggatacagcctgctgtacttcgag
ggccaggagaaggcccacaaccaggatctggggctggcgggctcctgcctggcccggttc
agcacgatgcccttcctgtactgcaaccctggcgacatctgctactacgccagccgcaac
gacaagtcctactggctctccaccaccgccccgctgcccatgatgcctgtggccgaggag
gacatcaggccctacatcagccgctgctccgtgtgcgaggccccggccgttgccattgcc
gtccacagccaggacgtctccatcccccactgcccggctggatggcggagcctgtggatc
ggatattccttcctcatgcacacggccgcgggcgacgaagggggcggccagtcgctggtg
tcaccgggcagctgcctggaggacttccgagccacgccgttcatcgagtgcaacggcgcc
cgaggcacctgccactactatgccaacaagtacagcttctggctcaccaccatccccgag
cagagcttccagggctcaccctcggccgacacactcaaggccggcctcattcgcacgcac
atcagccgctgccaggtgtgcatgaagaacctgtga

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