Stenella coeruleoalba (striped dolphin): 307176684
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Entry
307176684 CDS
T11893
Symbol
NFASC, ACYUVP_001957
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
scoo Stenella coeruleoalba (striped dolphin)
Pathway
scoo04514
Cell adhesion molecule (CAM) interaction
scoo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
307176684 (NFASC)
04517 IgSF CAM signaling
307176684 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scoo04515
]
307176684 (NFASC)
Cell adhesion molecules [BR:
scoo04515
]
Immunoglobulin superfamily
L1 family
307176684 (NFASC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Ig_PDGFR_d4
V-set_CD47
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
307176684
NCBI-ProteinID:
XP_079759157
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All DBs
Position
1:160874460..161062216
Genome browser
AA seq
1348 aa
AA seq
DB search
MARQQPPPWVHTAFLFCLLSLSGAIEIPMDLSQPPTITKQSVKEHIVDPRDNILIECEAK
GNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGT
ALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQD
KRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFNLKVLTNHPYNDSSLRN
HPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPS
DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILA
PGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCN
TSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ
GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPE
DQVAKRGTTVQLECRVKHDPSLKLTVYWLKDDEPLYVGNRMKKEEDSLTIFGVAERDQGS
YTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWI
PGDDNNSPITDYVVQFEEDQFQPGVWHDHSKFPGSVNSAILQLSPYVNYQFRVIAINEVG
SSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRR
RETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAP
TDVKIRVLNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAGFPGD
RLRGVVSRLFPYSNYKLEMAVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETIN
LEWDHPEHPNGILTGYTLKYVAFNGTKVGKQIVENFSPNQTKFTMQRADPVSRYRFSLSA
RTQVGSGEAVTEESPAPPNEAPPTSPPTTVGVTGTVGSTDATAATTEATTVPTIPTVAPS
TVATTTVATTTTTTAAATTTESPPTTTRTEIQESAPDEQSIWNVTVLPNSKWANITWKHN
FGPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYSRDNEGISSTVITF
MTSTAYTNNQADIATQGWFIGLMCAVALLVLTLLIVCFIKRSRGGKYPVREKKDVPLGPE
DPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQY
TVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcagcagccaccgccctgggtccacacagccttcctcttctgcctgctcagc
ctcagcggggccatcgagattcccatggatctgtcccagcccccaaccatcaccaagcag
tcagtgaaggagcacatcgtggatccccgcgataacatcttgattgagtgcgaagcaaaa
gggaaccctgcccccagcttccactggactcgcaacagtaggttcttcaacatcgccaag
gacccccgggtgtcgatgaggaggaggtctggtaccctggtgatcgacttccgcagtggc
gggcggccagaggagtatgagggggaataccagtgctttgcccgcaacaagtttggcacg
gccctgtccaataggatccgcctgcaggtgtccaaatctcctctgtggcccaaggaaaac
ctagaccctgtcgtcgttcaagaaggtgctcccttgacgctccagtgcaaccccccacct
ggacttccgtccccagtcatcttctggatgagcagctccatggagcccatcacccaagac
aagcgtgtctcccagggccataacggagacctgtatttctctaatgtgatgctgcaggac
atgcagacggactacagctgcaatgcccgcttccacttcacccacaccatccagcagaag
aacccattcaacctcaaagtccttaccaaccacccctataatgactcgtccttaagaaac
caccctgacatgtacagtgcccgaggagttgcagaaagaacacccagcttcatgtatccc
cagggcactgcaagcagtcagatggtgctgcgtggcatggacctcctgctggagtgcatc
gcctccggggtcccaacaccagacatcgcatggtacaagaaaggtggggacctcccgtct
gacaaagccaagtttgagaactttaacaaggccctgcgtatcaccaacgtgtccgaggaa
gactccggggagtatttctgcctggcctccaacaagatgggcagcatccggcacacgatc
tcggtgagagtaaaggctgctccctactggctggatgaacccaagaaccttatcctggct
cctggcgaggacgggagactggtgtgtcgagccaacgggaaccccaagcccaccgtccag
tggatggtgaatggggaacctttgcaatcggcaccacccaacccaaaccgtgaggtggcc
ggggacaccatcatcttccgggacacccagatcagcagcagggccgtgtaccagtgcaac
acctccaacgagcacggctacctgctggccaacgccttcgtcagcgtgctggacgtgccg
cctcggatgctgtcaccccggaaccagctcatcagggtgatcctgtacaaccgcacgcgg
ctggactgcccgttctttgggtctcccatccccacactccgatggtttaagaatgggcaa
ggaagcaacctggatggtggcaactaccatgtctacgagaacggcagtctggaaatcaag
atgatccgcaaagaggaccaaggcatctacacctgtgttgccaccaacatcctgggcaaa
gctgagaaccaggtccgcctggaggtcaaagaccccaccaggatctaccgcatgcctgag
gaccaggtcgccaaaaggggcaccacggtgcagctggagtgtcgcgtgaagcacgacccc
tccctgaagctcacggtgtactggctgaaggacgacgagcccctctacgtcgggaacagg
atgaagaaggaagaggactccctgaccatctttggtgtggccgagcgggaccagggtagc
tacacatgcgttgccagcaccgagctggaccaagacctggccaaggcctacctgaccgtg
ctagctgatcaggccactccaactaaccgtttggctgccctgcccaaaggacggccagac
cgaccccgggacctggagctcaccgacctggccgagaggagcgtgagactgacctggatt
ccgggggacgataacaacagccccatcacagactacgttgtccagtttgaagaggaccag
ttccagccaggggtctggcatgaccattccaagttcccaggaagtgtcaactcagccatc
ctccagctgtccccctatgtcaactaccagttccgggtcattgccatcaatgaggtgggc
agcagccatcccagcctcccgtccgagcgctaccgaaccagtggagcaccccctgagtcc
aacccctctgatgtgaagggagaggggaccagaaagaacaacatggagatcacgtggacg
ccgatgaacgccacctccgcctttggccccaacctgcgctacatcgtcaagtggcggcgg
agagagacccgagagacctggaacaatgtcactgtgtggggctcccgctatgtggtgggg
cagacccctgtctacgtgccctatgagatccgagtccaggcagaaaatgactttgggaag
ggccctgaaccggacactgtcatcggttactccggagaagattatcccagggctgcaccc
actgatgttaaaatccgagtcctgaacagcacagccatcagccttcagtggaaccgcgtc
tactccgacacggtccagggccagctcagagagtaccgagcctactactggagggagagc
agcttgttgaagaacctgtgggtgtctcagaagaggcagcaagccggcttccccggcgac
cgcctccgtggcgtggtgtcccgcctcttcccctacagtaactacaagctggagatggct
gtggtcaatgggcgaggcgatgggcctcgcagtgagaccaaggagttcaccaccccggaa
ggagtacccagtgcccccaggcgtttccgagtccggcagcccaacctggagacaatcaac
ctggaatgggatcatccagaacaccccaatgggatcctgactggatacactctcaaatac
gtggcctttaatggaaccaaagtaggaaagcagatagtggaaaacttctctcccaatcag
accaagttcacgatgcaaagagcagaccccgtgtcgcgctaccgcttttccctcagtgcc
aggacgcaggtgggctctggggaagcagtcacagaggagtcaccagcacccccgaatgaa
gctcctcccacgtcgcccccgaccacggtgggtgtgacgggcacggtgggcagtactgat
gccactgctgccaccaccgaagccacaacagtccccaccatcccaactgtcgcaccctcc
accgtcgccaccaccaccgtcgccacaactactacaaccactgccgccgccaccaccacg
gagagtcctcccaccaccaccaggactgagattcaagaatccgcccccgatgagcaatcc
atctggaacgtcacagtgctccccaacagtaaatgggccaacatcacctggaagcacaat
ttcgggcccggaactgactttgtggttgagtacatcgacagcaaccatacgaaaaaaact
gtccctgttaaggcccaggcccagcccatacagctgacagacctctatcccggtatgaca
tacacgttgcgagtttattcccgggacaacgagggcatcagcagtaccgtcatcaccttt
atgaccagtacagcctacaccaacaaccaggcggacatcgccacccagggctggttcatt
gggctcatgtgtgccgtcgccctcctggtgctgaccctgctcatcgtctgtttcatcaag
aggagtcgaggaggcaagtacccagtgcgagaaaagaaggatgttccccttggccctgag
gaccccaaagaagaggatggctcctttgattacagtgacgaggacaacaagcccttgcag
ggcagccagacatccctggatggtaccatcaagcagcaggagagtgatgacagcctggtg
gactacggcgagggcggcgagggacagttcaatgaggacggctccttcatcggccagtac
acagtcaaaaaggacaaggaagagacagagggcaacgaaagctcagaggccacatctcct
gtcaacgccatctattctctggcctaa
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