Stenella coeruleoalba (striped dolphin): 307178072
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Entry
307178072 CDS
T11893
Symbol
TOP3A, ACYUVP_003345
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
scoo Stenella coeruleoalba (striped dolphin)
Pathway
scoo03440
Homologous recombination
scoo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
307178072 (TOP3A)
03460 Fanconi anemia pathway
307178072 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scoo03032
]
307178072 (TOP3A)
03400 DNA repair and recombination proteins [BR:
scoo03400
]
307178072 (TOP3A)
Enzymes [BR:
scoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
307178072 (TOP3A)
DNA replication proteins [BR:
scoo03032
]
Eukaryotic type
DNA Topoisomerases
307178072 (TOP3A)
DNA repair and recombination proteins [BR:
scoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
307178072 (TOP3A)
FA (Fanconi anemia) pathway
307178072 (TOP3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
307178072
NCBI-ProteinID:
XP_079761857
LinkDB
All DBs
Position
19:complement(1778647..1805561)
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AA seq
1003 aa
AA seq
DB search
MIFPVVRRALTWLPRPGSRALTLADMEVALRGVRKILCVAEKNDAAKGIADLLSGGRMRR
REGLSRFNKIYEFDYRLRGQNVTMIMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEK
YCPENFLDIKKTLEREARQCQVLVIWTDCDREGENIGFEIIHVCKAVKPSLHVLRARFSE
ITARAVQAACENLLEPDRRVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPETFHRIRVTHDHRDGAVEFSWKRHRLFNHTACLVLY
QLCMEDPRATVVEVRSKAKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLDLTALVEEQTHDPRWGPFAQSILERGGPTPRNGNKSDQAHPPIHPT
KYTDSLQGDEQRLYELIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLVILARNYLDV
YPYDRWSEKTLPVYSRGSCFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKTRMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKLVVLQQQVQKYKQVFIEAMAKAQRLDEALSQYFGAGVELAQQEAIFPAVPEPVRKCPQ
CGKDMVLKTRKSGGFYLSCTGFPECRSAVWFPDSVLEASRDGSVCPVCQPHPVYRLKFKF
KRGSLPPTMPLEFVGCVGGCDETLREILDLRFSRGPTRAGQPVSQPSGHLQASQPLDRMG
SSQHGHPQPPAIRPSNALARTAPLPAAEGEGNSVTCNCGREALLLTVRKEGPNQGRQFYK
CSGGGCSFFLWADSGHPEAGGPPSEVPRPPGGSLGRPPGSGKPLGGPGSPGDGGGGARCL
CSQPAVTRTVQKDGPNKGRQFHTCAKPREQQCGFFQWVDENVAPGTFGGPPWAGARGGSR
EPEARSKRARAGSSDARSADKKPRKCSLCHQPGHTRPFCPQNR
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatcttccctgtcgtccgccgcgcgctcacctggctgccgcggcctgggagccgggcg
ctgaccctcgccgacatggaggtggccctgcgaggcgtgcggaagatcctctgcgtggcc
gagaagaacgacgcggccaagggcatcgcggacctgttgtccggaggccgcatgcggcgg
agagaaggactttccagattcaacaagatctatgaatttgattatcgtctgcgtggccag
aacgtcaccatgataatgacttcagtctcgggacacttgctggctcatgatttccagatg
cagtttcgcaagtggcagagctgcaatcctcttgtcctctttgaagcagaaattgaaaag
tactgcccagagaattttttagacatcaagaaaactctggaacgagaggctcggcagtgc
caggtgctggtgatctggaccgactgtgacagagaaggtgaaaacatcgggtttgagatc
atccacgtgtgcaaggctgtgaagcccagcctgcacgtgctgcgagcccgtttctccgag
atcaccgcccgcgctgtccaggcggcctgtgaaaacctgttggagcccgaccgcagagtg
agcgacgccgtggacgtgaggcaggagctggacctgcggatcggggctgccttcaccagg
ttccagaccctgcggctgcagaagatcttccctgaggtgttggcggagcagctgatcagt
tatggcagctgccagttccccaccctggggttcgtggtggagaggttcaaagccattcag
gcgtttgtgccagaaaccttccacagaatcagagtgactcacgaccacagggatggcgca
gtggagttcagctggaaaaggcatcggctcttcaaccacacggcttgtctcgtcctctat
cagctgtgcatggaggatcccagggcgaccgtggtggaggtcaggtccaaggcaaaaagc
aagtggaggcctcaagctttggacactgtggagcttgagaagctggcttctcgaaaattg
aggataaatgctaaagaaaccatgaggattgctgaaaagctctacactcaagggtacatc
agctatccccgaactgaaacaaacattttccccaaagacttagacctgacggcgctggtg
gaggaacagacccacgatccacgctgggggccctttgcccagagcattctagagcggggc
ggccccactccacgcaacgggaacaagtctgaccaagctcaccctcccatccaccccacc
aagtacacggacagcctgcagggggacgagcagcgactgtacgagctcatcgtccgccac
ttcctggcctgctgctcccaggatgcccagggccaggagaccaccgtggagattgacatc
gcacaggagcgcttcgtggcccacggcctcgtaatcctggcccgaaactatctggacgtg
tatccctacgatcgctggagtgaaaagaccctccctgtctacagtcgaggctcctgcttt
cagcccagcaccgtggagatggtggacggggagaccagtccaccccagctgctcactgag
gccgaccttatcgccctcatggagaagcacggcatcggtaccgacgcgacgcacgcggag
cacatcgagaccatcaagacccgaatgtacgtcgggctcacgccagacaagcgctttctc
cccgggcacctgggcatggggcttgtggaaggctatgactccatgggctacgagatgtcc
aagcctgacctgcgggccgagctggaggctgacctgaagctcatctgcgaggggaagaag
gacaagctcgtggtcctgcagcagcaggtgcagaagtacaagcaggtcttcatcgaagcc
atggccaaagcccagaggttggacgaggccttgtcgcagtactttggggcaggggtggag
ctggcccagcaagaagccatcttcccagctgtgccagagcccgtcaggaagtgcccacag
tgcggcaaggacatggtcctcaagaccaggaagagcggcgggttctacctcagctgcacg
gggttcccggaatgtcgctcggccgtgtggttcccggacagtgtgctggaggccagcagg
gacgggagcgtgtgtccagtgtgtcagccacaccccgtttacaggttgaagttcaagttt
aagcgaggcagccttcccccaaccatgccactggaatttgtcggctgcgttggtggctgt
gacgagaccctgagggagatcttggacctcaggttttcacgggggcccacccgagctggc
cagccggtcagccagccctccggccacctgcaggccagccagcccctggacagaatgggc
agcagccagcacggccacccccagcctcctgccatcaggccctcgaatgctctggccagg
actgcgcccctgcccgccgccgagggcgaaggcaactcggtgacctgcaactgtggccgg
gaggccctgctgctcaccgtccggaaggaggggcccaaccagggccgccagttctacaag
tgcagcggcggcggctgcagcttcttcctgtgggccgacagcggccacccagaagcaggg
gggcctccctccgaggtgcccagacccccgggcggctcactgggacgcccgccgggctca
gggaagcccctgggcgggcccggaagccccggcgatggtggcggcggcgcacgctgcctc
tgcagccagcccgctgtcacgcgcactgtgcagaaggacgggcccaacaaggggcgccag
ttccacacgtgcgccaagccccgggagcagcagtgcggctttttccagtgggtggacgag
aacgtggccccagggacctttggaggccccccctgggcaggagccagaggaggaagccgg
gagccggaggccagaagcaaaagggcccgggctggttcctcggacgccaggtccgcggac
aagaaaccccggaagtgcagcctttgccaccagcctggacacacccgtcccttctgtcct
cagaacagatga
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