Stenella coeruleoalba (striped dolphin): 307178335
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Entry
307178335 CDS
T11893
Symbol
CTCF, ACYUVP_003608
Name
(RefSeq) transcriptional repressor CTCF isoform 1
KO
K23195
transcriptional repressor CTCF
Organism
scoo Stenella coeruleoalba (striped dolphin)
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scoo03000
]
307178335 (CTCF)
03036 Chromosome and associated proteins [BR:
scoo03036
]
307178335 (CTCF)
Transcription factors [BR:
scoo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
307178335 (CTCF)
Chromosome and associated proteins [BR:
scoo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
307178335 (CTCF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
zf-C2H2_CASZ1
zf-WIZ
DUF8106
HMBD
Zn_ribbon_DUF2089
DUF7410
Motif
Other DBs
NCBI-GeneID:
307178335
NCBI-ProteinID:
XP_079762550
LinkDB
All DBs
Position
20:complement(19002430..19053127)
Genome browser
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGAVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEPQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaagagtctgaaactttcattaaaggaaag
gagagaaagacttaccagagacgccgggaagggggccaagaagaggacgcttgccaccta
ccccagaaccagactgatgggggtgaggtggtccaggatgtcaatagcagtgtacagatg
gtaatgatggaacagctggatcctacccttcttcagatgaagactgaagtaatggagggt
gcagttgctccagaagcagaggctgctgtagacgatacccagattataaccttgcaggtt
gtaaatatggaggaacagcctataaacataggagaacttcagcttgtgcaagtacccgtt
cccgtgactgtacctgttgctaccacttcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggccttgcagaaagtgaacccatgatatgtcacaccttacctttg
cctgaagggtttcaagtggtaaaagtgggggccaatggagaggtggagacgctagagcaa
ggggaacttccgcctcaggaagatcctagttggcaaaaagacccagactatcaaccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacggaggagggcaaagat
gtggatgtgtctgtgtacgattttgaggaagagcagcaggagggtctgctgtcagaggtt
aacgcagagaaagtggttggtaacatgaagcctccaaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacatgtccacggcgttcaaat
ttggatcggcacatgaaaagtcacactgatgagagaccacacaagtgccatctctgtggc
agggcattcaggacagtcacccttctgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgcgacatggcctttgtgactagtggagaattggtgcggcat
cgtcgttacaaacacacccatgagaagccatttaagtgttccatgtgcgattacgccagt
gtagaagtcagcaaattaaaacgtcacattcgctctcacactggagagcgtcctttccag
tgcagcttatgcagttacgccagcagggacacatacaagctgaaaaggcacatgagaacc
cattcaggggaaaaaccttatgaatgttatatttgtcatgcacggtttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctacattgagcagggcaagaaatgccgatactgcgatgctgtgtttcatgagcgctat
gccctcatccagcaccagaagtcacataagaacgagaagcgctttaagtgtgatcagtgt
gattacgcttgcagacaggagaggcacatgatcatgcataagcgcacccacaccggagag
aagccttatgcctgcagccactgcgacaagaccttccgccagaaacagctccttgacatg
cacttcaaacgctatcatgaccccaactttgtccccgcggccttcgtctgttctaagtgt
gggaaaacatttacacgccggaataccatggcaagacatgctgataattgtgctggtcca
gatggtgtagaaggggaaaatggaggagaaacgaagaagagtaaacgtggaaggaaaaga
aagatgcgctctaaaaaggaagactcctctgacagtgaaaatgctgagccagacctggat
gacaatgaggatgaggaggagcctgccgtggagattgaacccgagccagagcctcagcct
gtgaccccagccccaccacctgccaagaagcggagaggacgcccccctggcagaaccaac
cagcccaaacagacccagccaacagccattattcaggtcgaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagacgcagagcccgcagagggggag
gaagaggagccccagccagccgccacagacgcccccaacggagacctcacgcccgagatg
atcctcagcatgatggaccggtga
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