Stenella coeruleoalba (striped dolphin): 307181517
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Entry
307181517 CDS
T11893
Symbol
TRPM1, ACYUVP_006790
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1 isoform 6
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
scoo Stenella coeruleoalba (striped dolphin)
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scoo04040
]
307181517 (TRPM1)
Ion channels [BR:
scoo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
307181517 (TRPM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
YVC1_C
RraB
EBNA2_Core
Connexin
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
307181517
NCBI-ProteinID:
XP_079768083
LinkDB
All DBs
Position
2:complement(104567041..104651492)
Genome browser
AA seq
1643 aa
AA seq
DB search
MAWEYLGLISTFFLFQGQKSWIEKTFCKRECIFVIPSTKDPNRCCCGQLTNQHIPPLPSV
TASKNGEENKQVETQPEKWSVGKHTQSYPTDSYGILEFQGGGYSNKAMYIRVSYDTKPDS
LLHLMVRDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAVTTGAWIFTGGISTG
VISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLVGRDVTRVYQTMSNPLSKLSVLN
NSHTHFILADNGTLGKYGAEVMLRRQLEKHISLQKINTRLGQGVPVVGLVVEGGPNVVSM
VLEYLREEPPVPVVVCDGSGRASDVLSFAHKYSEEGGIINDSLRDQLLVTIQKTFNYNKT
QSHQLFAMIMECMKKKELVTVFRMGSEGQQDIEMAILTALLKGTNASARDQLSLALAWNR
VDIARSQIFVFGPRWPPLGSLAPPTDSKAMEKEKKPPTGTTKGGRGKGKGKKKGKVKEEV
EEETDPRKLELLNWVNALEQAMLDALVLDRVDFVKLLIENGVNMQHFLTIPRLEELYNTR
LGPPNTLHLLVRDVKKGNLPPDYHISLIDIGLVLEYLMGGAYRCNYTRKGFRTLYNNLFG
PKRPKALKLLGMEDDEPPAKGKKKKKKKKEEELDIDVDDPAVSRFQYPFHELMVWAVLMK
RQKMAVFLWQRGEESMAKALVACKLYKSMAHESSESELVDDISQDLDNNSKDFGQLAVEL
LDQSYKHDEQIAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRLRM
RKNPGLKVIMGILLPPTILFLEFRTCDDFSYQTSKENEDGKEKEEENMDANADTGSRKGD
EENEQKKQRSVPIGTKICEFYNAPIVKFWFYTISYLGYLLLFNYVILVRMERWPCLQEWI
VISYIVSLALEKIREILMSEPGKLSQKIKVWLQEYWNITDLVAISMFMIGAILRLQKQPY
MGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFGVA
RQAILHPDEEPSWKLARNIFYMPYWMIYGEVFADQIDLYAMEINPPCGDNQYDEEGKRLP
PCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHD
RPVLPPPMIILSHVYIIIMRLSRHCRKKREGDQDEQDRGLKLFLSDEELKRLHEFEEQCV
REHFQEKEDEQQSSSEERIRVTCERVENMSMRLEEINERENFMKTSLQTVDLRLSQLEEL
SSRMVNALENLAGIDKSDLIQTRSRASSECDATYLLRQSSINSADGYSMYRYLFNGEELY
EDTSRCMPPGTGFRKKVGSFRVKEEKDQRTHLVPERQGSLRLPPSTSTPASPDGDRLASD
NVKSTSEPKLSPDVGISAEDDERQADSKRGETSSPSFSQTEVMHGQNNLDFQSTQLTVET
TKIEGTISYPLEETKVTRYYPDETFSACKAMKSRSFVYSRGRKLVGGVNKWSAAGDQTCP
STVEQWTTEWRYQVQKIMRSQSTDIPSFGSETALQAEHQGHFTDTEDENYVSETGPQISR
LSLAVTDRTDKENLLSVKTHQTLGFPSLRSKSLHGHPRNAKAIQGTLDRSRHASSVSNLA
VVSRITTEDLKVKREKDSSETEC
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggaatatcttggtctaatttccactttttttctcttccagggacagaaatct
tggatagaaaaaaccttttgcaaacgagaatgtatctttgtaattcccagcactaaagat
cctaacaggtgttgctgtggccagctcaccaaccagcatatcccccctctgccgagcgta
acagccagcaaaaatggagaggagaacaagcaggtggagactcagcccgaaaaatggtct
gttggcaagcacacccagagctacccaacagattcctacgggattctcgaattccagggt
ggcggatactccaataaagccatgtatatccgggtctcctatgacacgaagccagactca
ctgcttcatctcatggtgagagactggcagctggaactccccaagctcttaatatccgtg
cacggaggcctccagaactttgagatgcagcccaagctgaagcaggtctttgggaaaggt
ctgatcaaggctgctgtgaccactggggcctggatcttcactgggggcatcagcacaggt
gtcatcagccacgtgggggatgccttgaaagaccactcctccaagtccagaggccgggtt
tgtgctataggaatcgctccctggggcatcgtggagaataaagaagatctggttggaagg
gatgtgacacgggtataccagaccatgtccaaccccctgagtaagctgtctgtgctcaac
aactcgcacacgcacttcatcctggctgacaatggcaccctgggcaagtatggtgccgag
gtgatgctgagaaggcagctggagaagcacatctctctgcagaagatcaacacaagactg
gggcagggtgtgcccgtcgtgggcctcgtggtggaagggggcccgaacgtggtttccatg
gtcctggagtatctccgagaagagcctccggtccccgtggtggtctgcgacggcagtggc
cgggcctcggacgtcctgtcttttgcacacaagtactctgaagaaggagggataatcaat
gactccctcagagaccagcttctagttaccattcagaaaacatttaattacaacaagaca
caatcgcatcagctctttgcgatgatcatggagtgcatgaaaaagaaagaacttgtcact
gtgtttagaatgggttccgagggtcagcaagacatcgaaatggcaattttaaccgccctg
ctgaaaggcacaaatgcatcggctcgggaccagctgagcttggcgctggcctggaaccgc
gtggacatagctcggagccagatcttcgtctttgggccccgctggccgcccctgggaagc
ctggcccccccaacggatagcaaggccatggagaaggagaagaagccacccacagggacc
accaaggggggcagaggaaaaggaaaaggcaagaagaaagggaaggtgaaagaggaggtg
gaggaagaaactgacccccggaagctcgagctgctgaactgggtgaacgctctggagcag
gccatgttggacgcgctggtcttagatcgagtagactttgtgaagctcctgattgaaaat
ggagtcaacatgcagcattttctcaccatcccgaggctggaagagctttataataccaga
ctgggtccaccgaacacacttcatttgctggtgagggatgtaaaaaagggcaaccttcca
cccgattaccacatcagcctcatagacattgggctcgtgctggagtacctcatggggggc
gcctaccgctgcaactacacaaggaagggcttccggaccctttacaacaacctgtttgga
cccaagaggcctaaagctctcaaacttctgggaatggaagatgatgagcctccagccaaa
gggaagaaaaagaagaagaagaaaaaggaggaggagttggacatcgatgtggacgacccc
gccgtgagtcgattccagtaccccttccacgagctgatggtgtgggccgtgctgatgaag
cgccaaaaaatggcggtcttcctctggcagcgcggggaggagagcatggcgaaggccctg
gtggcctgcaagctctacaagtcgatggcccacgagtcctccgagagcgagctggtggac
gacatctcccaggacctggacaacaactcaaaagactttggccagcttgctgtggagctc
ttggaccagtcctacaagcatgacgagcagatcgccatgaaactgctgacctacgagctg
aaaaactggagcaactcgacctgcctcaaactggctgtcgcagccaaacatcgggacttc
atcgcccacacctgcagccagatgctgctgactgacatgtggatgggaaggctgcggatg
aggaagaaccctggcctgaaggttatcatggggattcttctccccccgaccatcttgttt
ttggaatttcgcacctgtgatgacttctcatatcaaacatccaaggaaaatgaagacggc
aaagaaaaagaggaggagaatatggatgcgaatgcagacactggctcgagaaagggggac
gaggagaatgaacaaaaaaagcaaagaagtgttcccatcgggaccaagatctgtgaattc
tacaacgctcctattgtcaagttctggttttacacgatatcttacctgggttacctactg
ctgttcaactatgtcatcctggtgcggatggagcgctggccctgcctccaggagtggatc
gtcatctcctacatcgtgagcctggccctggagaaaattcgggagatcctcatgtcagag
cctggtaaactcagccagaaaataaaagtttggcttcaggaatattggaacatcacagac
ctcgtagccatttccatgttcatgattggagccatcctccgcctacagaagcagccctac
atgggctatggccgcgtgatctactgcgtggatatcatcttctggtacatccgtgtcctg
gacatctttggtgtcaacaagtatctgggaccctacgtgatgatgatcggaaagatgatg
attgacatgctgtattttgtggtcatcatgctggtggtgttgatgagtttcggggtagcc
cgtcaagccattttgcatccagatgaggagccttcttggaaactggcccgaaacatcttc
tacatgccctactggatgatctacggagaggtgtttgcagaccagatagacctctacgcc
atggaaatcaatcctccttgtggtgacaaccagtacgatgaggagggcaagcggctccct
ccctgcatcccgggcgcctggctcacgcccgccatcatggcttgctacctgctggtggcc
aacatcctgctcgtgaacttgctcatcgccgttttcaacaataccttctttgaagtaaag
tcaatatccaaccaagtgtggaaattccagcgttatcagctgattatgacatttcatgac
cggccagtcttgcctccaccaatgatcattttaagccacgtctatataatcattatgcgt
ctcagccgccactgcaggaagaaaagagaaggggaccaagacgaacaggatcgtggattg
aagctgtttctcagcgacgaggagctgaagaggctgcacgagtttgaagagcagtgtgtc
cgggagcatttccaggagaaggaggacgaacagcagtcgtccagcgaggagcgcattcgt
gtcacctgtgagagagttgaaaatatgtccatgaggttggaagaaatcaacgaaagagaa
aactttatgaaaacttccctgcagactgttgaccttcgcctttcccaactggaagaacta
tctagcagaatggtaaatgcgctggaaaacctcgcaggaatcgacaagtccgacctgata
cagacccggtcccgggcttcttctgagtgcgatgcaacataccttctaaggcaaagcagc
atcaacagtgccgatggctacagcatgtataggtatcttttcaacggggaggagttgtat
gaggatacttcccgctgcatgccaccagggacagggttcaggaaaaaagttggttccttc
cgtgtgaaggaagagaaggaccaaagaacgcacctggtcccagagcgtcagggcagcctt
cgcctgccacccagcacaagcacgccagcatccccagacggcgatcgacttgcatcagac
aacgtgaagagcacctcagagccgaaattaagtccagatgttgggatttcagctgaagat
gatgaaaggcaggcagactctaagagaggagaaacgagctccccaagtttcagtcaaaca
gaagttatgcacggacagaacaatttggattttcaaagcactcagctaacagtggaaaca
acgaagatagaaggcaccatttcttatcccctggaagaaacaaaagtgacccgttattac
cctgatgagacgttcagtgcttgtaaagcaatgaagtccagaagctttgtatattcccgg
ggaagaaagctggtcggcggggttaacaagtggagtgcagctggggaccaaacatgcccc
tccacggttgagcaatggaccacagagtggaggtatcaagttcaaaagattatgcgttct
cagagcacggatatcccttcctttgggtctgaaacggcactgcaggctgagcatcaaggg
catttcacagacaccgaagatgaaaactatgtttctgaaacaggccctcagatctcccgt
ttgtcactagctgttactgacagaactgacaaggaaaacttactgtctgtgaaaacacac
caaactttgggattcccatctttaaggtcaaaaagtttacacggccatcctaggaatgct
aaagccattcagggcaccttagacagatctagacatgccagcagtgtaagtaacttagca
gttgtgtccagaattacaacggaagacctgaaagttaagcgagagaaagattcctcagaa
actgaatgctaa
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integrated database retrieval system
