Stenella coeruleoalba (striped dolphin): 307186826
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Entry
307186826 CDS
T11893
Symbol
RFC4, ACYUVP_012099
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
scoo Stenella coeruleoalba (striped dolphin)
Pathway
scoo03030
DNA replication
scoo03410
Base excision repair
scoo03420
Nucleotide excision repair
scoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
307186826 (RFC4)
03410 Base excision repair
307186826 (RFC4)
03420 Nucleotide excision repair
307186826 (RFC4)
03430 Mismatch repair
307186826 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scoo03032
]
307186826 (RFC4)
03036 Chromosome and associated proteins [BR:
scoo03036
]
307186826 (RFC4)
03400 DNA repair and recombination proteins [BR:
scoo03400
]
307186826 (RFC4)
DNA replication proteins [BR:
scoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
307186826 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
307186826 (RFC4)
Chromosome and associated proteins [BR:
scoo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
307186826 (RFC4)
DNA repair and recombination proteins [BR:
scoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
307186826 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
307186826 (RFC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_assoc_2
Rad17
AAA_16
DUF815
AAA_22
AAA_11
AAA_30
Mg_chelatase
AAA_24
SLFN-g3_helicase
AAA_28
RuvB_N
AAA_5
AAA_19
ResIII
DNAX_ATPase_lid
AAA_7
Motif
Other DBs
NCBI-GeneID:
307186826
NCBI-ProteinID:
XP_079778510
LinkDB
All DBs
Position
5:complement(64294677..64308105)
Genome browser
AA seq
364 aa
AA seq
DB search
MQAFLKGTSISSKPPLTKDRGVAATARSSGENKKAKPVPWVEKYRPKYVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVTGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQEQRLLDIADKEHIKISNEGLAHLVKVSEGDLRK
AITFLQSATRLTGGKEVTEKVITDIAGVIPAETIDGVFAACQSGSFDKLEAVVKDLIDEG
HAATQLVNQLHDGVVENDNLSDKQKSVITEKLAEVDKCLADGADEHLQLIGLCATVMQQL
TQNC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttctaaaaggcacatctatcagcagtaaaccaccattgactaaggatcga
ggagtagctgccactgccagaagtagtggagagaacaagaaagctaaacctgttccgtgg
gtggaaaaatatcgcccaaaatatgtggatgaagttgctttccaggaagaagtggttgca
gtgctaaaaaagtctttagaaggagctgatctccctaatctcttgttttacggcccacct
ggaactggaaaaacatccactattttggcagcagctagggaactctttgggcctgaactt
tttcgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtagttaga
gagaaagtgaagaattttgcccaattaactgtgacaggaagccgttcagatgggaagcca
tgtcctccttttaaaattgtgatcctggatgaagcagattctatgacctcagctgctcag
gcagctttaagacgtaccatggagaaagagtctaaaaccacccgattctgtctcatctgt
aactatgtcagtcgaataattgaacctctgacctctagatgttctaaattccgcttcaaa
cctctgtcagataaaattcaagagcagcgattactagacatcgctgataaagaacatatc
aaaattagcaatgagggactagctcatcttgttaaagtgtcagaaggagacttaaggaaa
gccattacatttcttcaaagtgctactcgattaacaggtggaaaggaggtcacagaaaag
gtgatcacagacattgctggggtaataccagctgaaacaattgatggagtatttgctgca
tgtcagagtggctcttttgacaaactagaagctgtggtaaaggacttaatagatgagggt
catgcagcaactcagcttgtaaatcaacttcatgatggggttgtagaaaatgataacctt
tctgataaacagaaatctgttattacagaaaaacttgctgaagttgataaatgtttagca
gatggtgctgatgaacatctacagctgatcggcctctgcgcaactgtcatgcagcagtta
actcagaattgttaa
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integrated database retrieval system
