Stenella coeruleoalba (striped dolphin): 307187975
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Entry
307187975 CDS
T11893
Symbol
SCN9A, ACYUVP_013248
Name
(RefSeq) sodium channel protein type 9 subunit alpha
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
scoo Stenella coeruleoalba (striped dolphin)
Pathway
scoo04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
307187975 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scoo04040
]
307187975 (SCN9A)
Ion channels [BR:
scoo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
307187975 (SCN9A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
Toxin_22
Motif
Other DBs
NCBI-GeneID:
307187975
NCBI-ProteinID:
XP_079780716
LinkDB
All DBs
Position
6:complement(62690623..62776233)
Genome browser
AA seq
1989 aa
AA seq
DB search
MAMLPPPGPQSFVYFTKQSLALIEQRIAEGKTKEPKEEKKDDDEEGPKPSSDLEAGKQLP
FIYGDIPQGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYILSPFSPLRRISI
KILVHSSTAFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLVKILSRGFCV
GEFTFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLKQKCVRTPLENNETIESIFNTLDEEDY
GKYFYYLEGSKDALLCGFSTDSGQCPEGYTCVKVGKNPDYGYTSFDTFSWAFLALFRLMT
QDYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEARQK
ELEFQQMLDRLKKEQEEAEAIAMAAAEYTSIERSRIMGLSESSSETSKMSSKSAKERRNR
RKKNNQKKLSIGEEKGDDEKLSKSESEESIRRKSFHLGVEGHRRAHEKRFSTPNQSPLSI
HGSLFSARRSSRTSLFSFKGRGKDIGSETEFADDEHSIFGDNESRRGSLFMPHRPWERRS
SNISQASRSPPGLPVNRKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSG
TNNQIHKKRRSSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAH
TFLIWNCSPYWIKFKRLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLTVG
NLVFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKI
NEDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVV
LNLFLALLLSSFSSDNLTAIEEDTDANNLQTAVARIKKGINYVKQTLREFFLKAFSTKPK
ISKEIRRTEDLNYKKENYISNHTLAEMSKDHNFHKEKDKTSGFGNSMDKYLVEESDCQSF
IHNASLTVTVPIAPGESDLEIMNTEELSSDSDSEYSKGRLNGSSSSECSTVDNPVPGEGE
EAEAEPVNSDEPEACFTDGCVQRLPCCQVNTESGKGKIWWNIRKTCYRIVEHSWFESFIV
LMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWC
WLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIP
SIMNVLLVCLIFWLIFSIMGVNLFAGKFYQCVNTTDGSPFPTSEVENRSECFALMNVSQN
VRWKNLKVNFDNVGLGYLSLLQVATFKGWMVIMYAAVDSVNVDRQPIYEYSLYMYIYFVI
FIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPR
PGNKFQGCIFDLVTNQAFDIAIMVLICLNMVTMMVEKEGQSAYMTDVLYWINVVFVILFT
GECVLKLISLRCYYFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGR
ILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMF
NFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPRKVHPGSSVEGDCGNPSVGIFY
FVSYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEY
SKLSDFAAALDPPLLVAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSL
RSQMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYVKD
GDRDDDLPNKEDMVFDNVNENSSPEKTDGTPSTISPPSYDSVTKPDKEKYEKDKTEKEDK
GKDGKEGKK
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgcctcccccaggacctcagagctttgtctacttcacaaaacagtctctt
gccctcattgaacaacgtattgctgaaggaaaaacaaaggaacccaaagaagaaaagaaa
gacgatgacgaagaagggccaaagccaagcagtgacttggaagccggcaaacagctgccc
ttcatctatggggacatccctcagggcatggtttcggagcccctggaggacctggaccct
tactatgcagacaaaaaaactttcatagttttgaacaaagggaaagcaatcttccgtttc
aatgccacacctgctttgtacatcctctctcctttcagtcctctcagaagaatatctatt
aagattttagtacactcatctaccgcattcagcatgcttatcatgtgcactattctgacg
aattgcatatttatgaccatgagtaaccctccagattggaccaagaatgtagagtacact
tttactggaatatatacttttgaatcacttgtaaaaatcctttcaagaggcttctgtgta
ggagaattcactttccttcgtgacccttggaactggcttgattttattgtcattgttttt
gcgtatttaacagaatttgtaaatctaggcaatgtttcagctcttcgaactttcagagtg
ttgagagctttgaaaactatttctgtaatcccaggcctgaagaccatcgtaggggccctg
atccagtctgtgaagaagctttctgacgtcatgatcctgactgtgttctgtctgagcgtg
tttgcactgattggactgcagctctttatgggcaacctgaagcaaaaatgtgtgcggact
ccgcttgaaaataatgaaacaatagaaagcatatttaatactctcgatgaagaagactat
ggaaaatatttttattacttggagggatccaaagatgctctcctttgtggtttcagcacc
gattcaggtcagtgtccagaagggtacacctgtgtgaaggttggcaagaaccccgattat
ggctacacgagcttcgatactttcagttgggccttcttagccttgtttcggctaatgacc
caggattactgggaaaacctttaccaacagacactgcgtgctgctgggaaaacctacatg
atcttctttgttgtggtgattttcctgggatccttttatctaataaacttgatcctggca
gtggttgccatggcctatgaagaacagaaccaggcaaacatcgaggaagctaggcagaaa
gagttggaatttcaacagatgttagatcgacttaaaaaagagcaagaggaagctgaggca
atagcaatggcagcagctgaatatacaagcatcgagagaagccggataatgggcctctcc
gagagttcttccgaaacatccaaaatgagctctaaaagtgctaaagaaagaagaaacaga
agaaagaaaaataatcaaaagaaactctccattggggaagaaaagggagatgatgagaaa
ttgtccaaatcggaatccgaggagagcatcaggagaaaaagtttccaccttggtgttgaa
ggtcataggcgagcacatgaaaagagattttctacccctaaccagtcaccactcagcatt
catggctccttgttttctgcaaggcgaagtagcagaacaagtctttttagtttcaaaggt
cgaggaaaagatattggatctgagactgaatttgctgacgacgagcatagcatctttggg
gacaatgagagcagaaggggctcactgttcatgccccacagaccttgggagcggcgcagc
agtaatatcagccaagccagtaggtcccccccagggctgccggtgaacaggaagatgcac
agcgccgtggactgcaatggtgtggtctccttggtggatggaccctcagccctcatgctc
cccaatggacagcttctgccagaggtgataatagataaggcaacttctgatgacagtggt
acaaacaatcaaatacacaagaaaagacgttccagttcttacctcctttctgaggatatg
ttgaatgatcccaatctcagacaaagggcaatgagtagggcaagcatattaacaaacact
gtagaagaactcgaggagtccagacaaaaatgtccaccttggtggtacagatttgcacac
acattcttgatctggaattgctctccatattggataaaattcaaaagacttatctatttt
attgtaatggatccttttgtagatcttgctattaccatttgcatagttttaaacactctg
ttcatggctatggaacatcacccaatgactgatgaattcaaaaacgtgctcactgtggga
aatttggtctttactggcatctttgcagctgaaatggttttaaaactaattgccatggat
ccatatgagtacttccaagtaggatggaatatttttgacagtcttattgtgactttaagc
ttagtggagctttttctagcagatgtggaaggattgtcagttctacgatcattcagactg
ctccgagttttcaagttggcaaaatcttggccaacactgaacatgctgatcaagatcatt
ggtaactcagtgggggctctgggtaacctcaccttggtgttggccatcatcgtcttcatt
tttgccgtggttggcatgcagctctttggtaagagctacaaagaatgtgtctgtaagatc
aatgaagactgcacactcccacgctggcacatgaatgacttcttccactccttcctgatt
gtgttccgagtgctgtgtggagagtggatagagaccatgtgggactgcatggaggtcgct
ggtcaagccatgtgccttattgtttacatgatggtcatggtcattggaaacctggtggtc
ctcaacctatttcttgctttattattgagctcatttagttcagacaatcttacagcaatt
gaagaagacactgatgcaaacaacctccagactgcagtggctagaattaagaagggaata
aattatgtgaaacaaaccttacgtgaattttttctaaaagcattttccacaaagccaaag
atttccaaagagataagacgaacagaagatctaaattataagaaggaaaactacatctct
aaccacacacttgctgaaatgagcaaggatcacaattttcacaaagaaaaagataaaacc
agtggttttggaaacagcatggacaaatacttggtggaagaaagtgattgtcaatcattt
attcataatgccagcctcacagtgacagtgccaattgcacccggggaatctgatttggaa
attatgaatactgaggaacttagcagtgattcagatagtgaatacagcaaagggaggctg
aacggatcgagttcctctgagtgcagcacagttgataaccctgtgccaggagaaggagag
gaagcagaggctgagcctgtaaattcagatgagccagaggcctgttttacagatggttgt
gtgcagaggctcccatgctgccaagttaacacagaatcagggaaaggaaaaatctggtgg
aacatcaggaagacctgctataggatagttgagcacagttggtttgaaagcttcattgtc
ctcatgatcttgcttagcagtggtgctctggcttttgaagatatatatattgaaaagaaa
aagaccattaagattatcctcgagtatgctgacaagatattcacttacatctttattctg
gaaatgcttctaaaatggatagcatatggttataaaacctatttcaccaatgcctggtgt
tggctggatttcttaattgtcgatgtttctttggttactttggtcgcaaacactcttggc
tactcagaccttggccccattaaatcccttcggacacttagagccttaagacctctgaga
gctttatctagatttgaaggaatgagggtggtcgtgaatgcactcataggtgcaatccct
tccatcatgaatgtgctacttgtgtgtcttatattctggctaatatttagcatcatggga
gtaaatttgtttgctggcaagttctatcagtgtgttaacaccacagatgggtcaccgttt
cctacaagtgaagttgaaaatcgttctgagtgttttgcacttatgaatgttagtcaaaat
gtgcgatggaagaacctgaaagtgaactttgataatgttggacttggttacctgtctctg
cttcaagttgcaacatttaaaggatggatggttattatgtatgcagcagttgattctgtt
aacgtagacaggcagcccatatatgaatacagcctctacatgtatatttattttgtcatc
ttcatcatctttgggtcattcttcaccttgaacttgttcattggggtcatcatagataac
ttcaaccaacagaaaaagaagcttggaggtcaagatatctttatgacagaagaacagaag
aaatattataatgcaatgaaaaagctgggatccaagaaacctcaaaagccaatacctcgt
ccggggaacaaattccaaggatgtatatttgacctagtaacaaaccaagcttttgatata
gccatcatggttcttatctgcctcaacatggtaaccatgatggtagaaaaagagggacaa
agtgcatacatgactgacgttttatattggatcaatgtagtttttgttatccttttcact
ggagaatgtgtgctgaaactgatctccctcagatgctactacttcactgtaggatggaac
atttttgattttgtggttgtgattctctccattgtaggtatgtttctagcagatttgata
gaaaggtattttgtgtcccctaccctgttccgagtgatccgtcttgccaggattggccga
atcctgcgtctgatcaaaggggccaaggggatccgcacgctgctctttgctttgatgatg
tcccttcctgcgttgtttaacatcggcctcctgctctttctggtcatgttcatttacgcc
atctttggaatgtccaactttgcctacgttaaaaaggaagctggaattaatgacatgttc
aactttgagacctttggcaacagcatgatctgcctgttccagattaccacctctgctggc
tgggatggattgctagcacctattctcaacagtgcaccacctgattgtgaccccaggaaa
gttcatcctggaagctcagttgaaggagactgtgggaacccatctgtggggatattctat
tttgtcagttacatcatcatatcattcctggtcgtggtgaacatgtacatcgctgtcatt
ctggagaacttcagtgttgccactgaagaaagtactgagccgctgagtgaggatgacttt
gagatgttctacgaggtttgggagaagtttgatcccgatgccacccaatttatagaatat
agcaaactctctgattttgcagctgccctggatcctcctcttctcgtagcaaaaccaaac
aaagtccagctcattgccatggatctgcccatggtcagtggggaccggatccattgtctc
gacatcttatttgcttttacaaagcgtgttttgggtgaaagtggagagatggactctctt
cgttcacagatggaagaaaggttcatgtctgcaaatccttctaaagtgtcctatgaaccc
atcacaactacactaaaacgaaaacaggaagatgtgtctgctactgtcattcagcgtgct
tacagacgttatcgcttacggcaaaatgtcaagaacatatcaagtatatacgtaaaagat
ggtgacagagatgatgatttgcccaataaagaagatatggtttttgataacgttaatgag
aactcaagtccagaaaaaacagatggaactccatccaccatctctccaccttcatatgat
agtgtaacaaaaccagacaaagagaaatatgaaaaagacaaaacagaaaaggaggacaaa
ggaaaagatggcaaggaaggcaaaaaatag
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