Stenella coeruleoalba (striped dolphin): 307190628
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Entry
307190628 CDS
T11893
Symbol
SYVN1, ACYUVP_015901
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform 1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
scoo Stenella coeruleoalba (striped dolphin)
Pathway
scoo04120
Ubiquitin mediated proteolysis
scoo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
307190628 (SYVN1)
04120 Ubiquitin mediated proteolysis
307190628 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scoo04121
]
307190628 (SYVN1)
Enzymes [BR:
scoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
307190628 (SYVN1)
Ubiquitin system [BR:
scoo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
307190628 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING-like
U-box_ZFPL1
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
zf-RING_Vps41
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
307190628
NCBI-ProteinID:
XP_079786032
LinkDB
All DBs
Position
8:7275289..7281425
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AA seq
639 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPEPADQGPPPAPHPP
PLLPQPPNFAQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGDAVAPPSTSAALSRPSGAA
TTTAGSAASAPAPGSASTPDAGPAPGFPFPPPWMGMPLPPPFGKLGRSWGCFGRCGGVRP
RQPRLSLSLSPAFPPMPVPPAGFAGLTPEELRALEGHERQHLEARLQSLRNIHTLLDAAM
LQINQYLTVLASLGPPRPATSANPTEETAPTAVAAAFSTSTPSSEATTPSLGASPPAPEP
EKPSAPESAGTEELPEDGEPDAAELRRRRLQKLESPVAH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgccgtgatgatggcggccagcctggcgctgaccggggccgtggtggct
catgcctactacctcaagcaccagttctaccccaccgtggtgtacttgaccaagtctagc
cccagcatggcagtcctgtacatccaggccttcgtccttgtcttcctcttgggcaaggtg
atgggcaaggtgttctttggacagctgagggcagcagagatggagcatctcctggaacgt
tcctggtatgctgtcactgagacttgtctggccttcactgtttttcgggatgactttagc
ccccgctttgtggcactcttcactctccttctcttcctcaagtgttttcactggctggct
gaggaccgtgtggactttatggaacgcagccccaatatctcctggctctttcactgccgc
attgtgtcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgactatggtgctcaccatcttcatcaagtacgtgctgcactctgtggacctccag
agcgagaatccctgggacaataaggccgtgtacatgctctacacggagctgtttacaggc
tttatcaaggttctgctgtacatggctttcatgaccatcatgatcaaggtgcacactttc
cctctctttgccatccggcctatgtacctggccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagctatccgcaacatgaacacactgtatccagacgccacc
ccagaggaactccaggcgatggacaacgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacattttccacaccagctgcttgcgctcctggttc
cagcggcagcagacctgccccacctgccgtatggatgtccttcgggcgtcgctgccgacc
cagtcaccaccgccccctgagcctgcggatcaggggccaccacctgccccccacccccca
ccactcctgccccagccccccaacttcgcccagggcctcctgcctcccttccctccaggc
atgttcccgctgtggccccccatgggcccctttcctcctgtcccacctccccccagctct
ggagacgctgtggcccctccgtccaccagtgcagccctttctcggcccagtggagcagcc
acaaccacagctggttctgctgcctctgccccagcacctggctcggcctccacccctgac
gctggccctgccccaggcttccccttccctcccccgtggatgggcatgccgctgcctcca
ccttttggtaagctgggccgctcgtggggttgttttgggaggtgtgggggtgtcaggccc
aggcagcccaggctgagcctctctctctctccagccttccccccgatgcctgtgcctcct
gccggctttgctgggctgaccccagaggagctgcgggctctggaaggccacgagcggcag
cacctggaggcccggctacagagcctgcgcaacatccacacgctgctggatgccgccatg
ctgcagatcaaccagtacctcaccgtgctcgcctccctcgggcccccccggcctgccacc
tcagccaaccccactgaggagactgcccctacagctgtcgctgctgccttctccaccagc
acccccagctctgaggccaccaccccatccctgggagcctccccaccagcccctgaacct
gaaaagccttcagctcctgagtcagcgggcaccgaggagctgcctgaggatggggagcct
gacgcagcagagctccgccgccgtcgcctgcagaagttggagtcccctgttgcccactga
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