Stenella coeruleoalba (striped dolphin): 307191611
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Entry
307191611 CDS
T11893
Symbol
VPS50, ACYUVP_016884
Name
(RefSeq) syndetin isoform 1
KO
K23288
syndetin
Organism
scoo Stenella coeruleoalba (striped dolphin)
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scoo04131
]
307191611 (VPS50)
Membrane trafficking [BR:
scoo04131
]
Protein recycling
Others
EARP complex
307191611 (VPS50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
MJ1674_2nd
Motif
Other DBs
NCBI-GeneID:
307191611
NCBI-ProteinID:
XP_079787885
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All DBs
Position
9:complement(48786710..48928898)
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AA seq
964 aa
AA seq
DB search
MQRIKSLMTRQGLKSPPESLSDVGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQDLEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEDTTSASEG
SNMMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPNKQPSSTSSKMVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKQDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTFG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNTRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLSAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaatcaaatctcttatgacccggcagggtctgaaaagtcccccagagagcctc
agtgatgttggtgccattgagagtctccgggtccctggaaaggaggaatttcgagaactt
cgagaacaacctagtgatcctcaagctgaacaagaactaattaatagtatcgaacaagtg
tatttttctacggactcatttgatattgttaaatatgagctggagaagctccctcctgtt
ctcaatttgcaagacttagaggagtacagagacaaattaaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacaggtcttcagttagctgctgttatctgcacaaatgggagg
agacacctgaatattgcaaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtccgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagctgtgcctggaatgtcagaaagctgctagcacttttaaacattacagttgcataagt
gaactgaattcaaagctgcaagatactttagagcaaattgaggaacagttggatgttgct
ctgtccaaaatctgcaagaattttgacattaaccattataccaaggttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcataatactgtgtttcaagttgttcttggttatgtggaactatgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacgcatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaggttatgctcagctattac
agaactatggaatggcatgaaaagcatgacagtgaagatactacttctgcttctgaaggg
agtaatatgatgggtactgaagaaacaaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgctt
ggaactgatttgtcaatattcaaatatgatgacttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattctgtggtagcaagtctgaagttttgcaagagtct
attagaaaacaaagtgtcaattattttaagaactaccatagaacacggcttgatgaactg
agaatgtttctagaaaatgagacctgggaactttgtcctgttaagtcaaatttcagcatc
ttgcagcttcacgaatttaaattcatggaacagtcacgttccccatcagtttcacccaat
aagcaaccatcctcaacttcctcaaaaatggtaaccttgtttgagcagtactgtagtggt
gggaatccatttgaaattcaggctgaccacaaagatgaagaaacagaagacgtcctggct
tctaatgggtatgaatctgatgaacaagaaaaaagtgcctatcaggagtatgacagtgac
agtgatgttcctgaggaactaaaacaagattatgttgatgagcagacaggcgatgctcct
gtgaaaagcgtttctcgagagactctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacactgaatgtaataagacttgttggtaaa
tatatgcagatgatgaacattcttaaaccaattgcttttgatgttatccatttcatgtct
cagctatttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatccacgggactaggtcttagcagtagtagactaagaacaactctaaacagaatacaa
gaaagcctcattgatctggaagtttcagctgatcctactgccacgctcacagcagcagaa
gagagaaaggagaaggtaccgagccctcacctcagtcacctagtggttttgacatttggg
gatacattgtatgggttggcggaaagagtggtagccacagaatccttggtattcttggct
gaacagtttgagttccttcagccacatctggatgctgtgatgcctgcagtcaaaaaaccc
tttcttcagcagttttattctcagaccgtctcaacagccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctcctaatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatgcactgtta
aaggaatttgagcagtttaacacgaggttaaatgaagtttctaagagagttcggataccc
ttgcccgtgtctaatatactttgggaacattgtatacgtctggctaatagaacaattgtg
gaaggatatgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggat
tttcagcagtttttaatgaaacttgaaaaactaacagatatcagaccaattccagataaa
gaatttgtggaaacctatattaaagcttactatctaactgagaatgacatggaacgctgg
atcaaagagcatagggagtattcgacgaagcagctgaccaatctggtaaatgtttgcctg
ggatcccatatcaataagaaagcaagacaaaaacttctctcagctatagatgatatagac
agacccaaaagataa
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