Stenella coeruleoalba (striped dolphin): 307194095
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Entry
307194095 CDS
T11893
Symbol
COL2A1, ACYUVP_019368
Name
(RefSeq) collagen alpha-1(II) chain isoform 2
KO
K19719
collagen type II alpha
Organism
scoo Stenella coeruleoalba (striped dolphin)
Pathway
scoo04151
PI3K-Akt signaling pathway
scoo04510
Focal adhesion
scoo04512
ECM-receptor interaction
scoo04518
Integrin signaling
scoo04974
Protein digestion and absorption
scoo05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
307194095 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
307194095 (COL2A1)
04518 Integrin signaling
307194095 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
307194095 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
307194095 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
307194095 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
scoo00536
]
307194095 (COL2A1)
Glycosaminoglycan binding proteins [BR:
scoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
307194095 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
307194095
NCBI-ProteinID:
XP_079793069
LinkDB
All DBs
Position
11:64391725..64422739
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AA seq
1488 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLTTASGRQPGPKGQKGEPGDIKDIVGPK
GPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNF
AAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVAGPM
GPRGPSGPPGKPGDDGEAGKAGKPGERGLPGPQGARGFPGTPGLPGVKGHRGYPGLDGAK
GEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPV
GPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEAGTPGSPGPAGASGNPGSDGIPGAK
GSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPTGPQ
GAPGPAGEEGKRGARGEPGGAGPAGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLA
GPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAAGEDGRPGPPGPQGTRGQP
GVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAP
GPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGLQGPR
GLPGTPGTDGPKGAAGPGGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAP
GKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGTAGARGAPGERGETGPPGPAGFAGPP
GADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFP
GAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPSGPPGEKGEP
GDDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPP
GPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPA
GPVGKQGDRGEAGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQ
GLPGPPGPAGDQGTSGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPA
GPPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPMQYMRADEAASNLRQHDAEVDATL
KSLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMDT
GETCVYPSPASVPKKNWWNSKSKDKKHIWFGETINGGFHFSYGDDNLAANTANVQMTFLR
LLSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCT
KHTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg
tataacgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcaccactgccagtggtcggcaa
ccaggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaa
ggacctcctgggcctcagggacctgcaggtgaacaaggacccagaggtgatcgtggtgac
aaaggtgaaaaaggtgctcctggacctcgtggcagagatggagagcctgggacccctgga
aaccctggtccccctggccctcctggcccccctggcccccctggtcttggtggaaatttt
gctgctcagatggctggaggatttgatgagaaggctggtggcgcccagttgggagtaatg
cagggaccaatgggccccatgggacctcggggacctccaggccctgctggtgctcccgga
cctcaaggatttcaaggcaaccctggtgaacctggggaacccggcgttgctggtcccatg
ggtccccgcggcccttctggcccccctggaaaacctggtgacgatggtgaagctggaaag
gctggaaaacctggcgagagaggccttccgggtcctcagggtgctcgcggcttcccagga
accccaggccttcctggtgtcaaaggtcacagaggttacccaggtctagatggtgctaag
ggagaagctggtgctccaggtgtgaagggtgagagtggttccccaggagagaacggttct
ccaggcccaatgggtccccgtggcctgcctggtgagagaggacggactggccctgctggc
gctgcgggtgctcggggcaacgatggccaacccggccccgcagggcctccgggtcccgtg
ggtcctgctggcggtcctggcttccccggtgctcctggtgccaagggtgaagctggcccc
accggtgctcgaggtcctgaaggcgcccagggtcctcgcggtgaagctggtactcctggg
tcccccgggccggctggtgcctctggtaaccctggatcggatggaattcctggagctaaa
ggatctgctggtgcccctggcattgctggtgctcccggcttccctgggccccgtggtcca
cccggccctcaaggtgcaactggtcctctgggcccgaaaggtcaaacgggtgagcctggt
attgctggcttcaaaggcgaacagggccccaagggagaaccgggccctactggtccccaa
ggagcccccggtcctgctggtgaagaaggcaaaagaggggcccgtggagagcctggtggt
gctgggcccgctggtccccctggagaaagaggtgctcctggcaaccgtgggttcccaggt
caggatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggtcttgct
ggtcccaagggagccaatggtgaccctggccgtcctggagagcctggcctccctggagcc
cggggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggtccttctgga
gccgctggtgaagatggtcgccctggacctccaggtcctcaggggactcgtgggcagcct
ggtgtcatgggtttccctggccccaaaggtgccaatggtgagcctggcaaagctggtgag
aaaggactgcctggtgctcctggtctgagaggtctccctggcaaagatggtgagacagga
gctgcaggcccccctggacctgctggacctgccggtgaacgaggcgagcagggtgctcct
gggccatctgggttccagggacttcctggcccgcctggtcccccaggtgaaggtggaaaa
ccaggtgaccagggcgttcctggtgaagctggagctcccggcctcgtgggtcccaggggt
gaacgaggtttcccaggggaacgtggctctccagggtcccagggcctccaggggccccgc
ggcctccctggcactcctggcactgatggtcccaaaggtgcagctggcccaggtggcccc
cctggggctcagggccctccaggtctgcaggggatgcccggtgagagaggagcagctggc
atcgctgggcccaagggagacaggggtgatgttggtgagaaaggccccgagggagccccc
gggaaagacggcggacggggtctgactggccccattggcccccctggcccggctggtgcc
aacggtgagaagggagaagttggacctcctggtccttcaggaactgctggtgctcgcggc
gccccgggtgaacgtggagagactggaccccccgggcctgctggatttgctggtcctcct
ggtgctgacggccagcctggtgccaaaggcgagcaaggagaggctggccagaaaggtgac
gccggtgccccgggtcctcagggcccctctggagctcccgggcctcagggtcctactggt
gtgactggtcctaaaggagcccgaggcgctcaaggccccccgggagccaccggattcccc
ggagctgcaggccgcgtcggacccccaggttccaatggcaaccctggaccccctggccca
cctggtccttctggaaaagatggtcccaaaggtgctcgaggagacagcggcccccctggc
cgagctggtgaccctggcctccaaggtccttctggaccccctggcgagaagggagagcct
ggagatgacggtccttctggtcccgacggtcctccaggtccccagggtctggccggtcag
aggggcatcgtcggtctgccggggcagcgtggtgagcgaggattccccggcctgcccggc
ccatcgggtgagcctggcaagcagggagctcctggagcatctggagaccgaggtccccct
ggccccgtgggtcctcctggcctgactggacctgcgggtgaacctggacgcgagggaagc
cctggtgctgacggcccccctggcagagacggtgcagctggagtcaagggtgatcgtggt
gagaccggtcccttgggtgcccccggagccccagggccccctggctctcctggccccgcc
ggcccagtcggcaagcagggagaccgaggagaagctggtgcacaaggccccatgggaccc
tcaggaccagctggagcccggggaatgccaggccctcaaggcccccgaggtgacaaagga
gaaacgggagaggctggcgagaggggactgaaaggacaccgtggcttcactggtctgcag
ggtctgcccggcccccctggtcccgctggagaccaagggacttctggtcctgccggccct
tctggccccagaggtcctcctggccccgtcggtccctctggcaaagatggcgctaatgga
atccccggccccattggccctcctggaccccgtggacgttcaggcgaaaccggccctgct
ggtcctcctggaaatcctggaccccctggccctccaggtccccctggccctggcattgac
atgtccgcctttgctggcctaggccagagagagaagggccccgaccccatgcagtacatg
cgggccgatgaggcagccagcaacctgagacagcacgacgccgaggtggatgccacgctc
aagtccctcaacaaccagatcgaaagcatccgcagccccgagggatcccgcaagaacccc
gcccgcacctgccgggacctgaaactctgccaccccgagtggaagagcggagattactgg
atcgacccgaaccagggctgcaccctggacgccatgaaggttttctgcaacatggacact
ggcgagacctgcgtctaccccagcccggccagcgttcccaagaagaactggtggaacagc
aagagcaaggacaagaaacacatctggtttggagaaaccatcaacggtggcttccacttc
agctatggagatgacaacctggctgccaacaccgccaacgtccagatgaccttcctgcgc
ctgctgtccaccgagggctcccagaacatcacctaccactgcaagaacagcattgcctac
ctggacgaggccgctggcaacctcaagaaggccctgctcatccagggctccaacgacgtg
gagatccgggccgagggcaacagcaggttcacgtatacggttctgaaggatggctgcacg
aaacacaccggtaagtggggcaagactatgattgagtaccggtcgcagaagacctcacgt
ctccccatcattgacattgcacccatggacataggcgggcccgagcaggaattcggtgtg
gacatagggcctgtctgcttcttgtaa
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