KEGG   Stenella coeruleoalba (striped dolphin): 307195937
Entry
307195937         CDS       T11893                                 
Symbol
ACYUVP_021210
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
scoo  Stenella coeruleoalba (striped dolphin)
Pathway
scoo04066  HIF-1 signaling pathway
scoo04120  Ubiquitin mediated proteolysis
scoo05170  Human immunodeficiency virus 1 infection
scoo05200  Pathways in cancer
scoo05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:scoo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    307195937 (ACYUVP_021210)
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    307195937 (ACYUVP_021210)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    307195937 (ACYUVP_021210)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    307195937 (ACYUVP_021210)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    307195937 (ACYUVP_021210)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:scoo04121]
    307195937 (ACYUVP_021210)
   03400 DNA repair and recombination proteins [BR:scoo03400]
    307195937 (ACYUVP_021210)
Ubiquitin system [BR:scoo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     307195937 (ACYUVP_021210)
   Cul5 complex
     307195937 (ACYUVP_021210)
DNA repair and recombination proteins [BR:scoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     307195937 (ACYUVP_021210)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 307195937
NCBI-ProteinID: XP_079796700
LinkDB
Position
1:complement(82657165..82657886)
AA seq 113 aa
MIRRHKTTIFTDAKESSTVFELKRIVEGIFKRPPDEQRLYKDDQLLDDGRTLGECGFTSQ
TARPQAPATVGLAFRADEAFEALRIEPFSSPPELPDVIKPQDSGSSANEQDVQ
NT seq 342 nt   +upstreamnt  +downstreamnt
atgatccggcgccacaagaccaccatcttcacggacgccaaggagtcgagcactgtgttc
gagctcaagcgcatcgtcgagggcatcttcaagcggccgccggacgagcagcggctgtac
aaggacgaccagcttctggacgacggaaggacattgggcgagtgtggcttcaccagccag
acagcacggcctcaggccccagccactgtggggctagctttcagggcagatgaggccttt
gaggccctgcgcatcgagcccttctccagcccacccgagctgccagatgtgataaagcca
caggactcaggaagcagcgccaatgaacaagatgtgcagtga

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