Stenella coeruleoalba (striped dolphin): 307195960
Help
Entry
307195960 CDS
T11893
Symbol
SPTBN1, ACYUVP_021233
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
scoo Stenella coeruleoalba (striped dolphin)
Pathway
scoo04517
IgSF CAM signaling
scoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
307195960 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
307195960 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scoo04812
]
307195960 (SPTBN1)
Cytoskeleton proteins [BR:
scoo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
307195960 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
307195960 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
307195960
NCBI-ProteinID:
XP_079796746
LinkDB
All DBs
Position
13:complement(44823939..45020002)
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRIAARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVVRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIA
YIREQWAHLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDSLHEQAGALPQEHAESPDVQGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEAGACELWIDEKEQWLDNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNISSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
RAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMALLEPLNERKQNLLASREIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSLNAE
AIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKAEDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPP
SPEPSSKVSEETESQQQWDASKGEQVSQNGLPAEQGSPRMAETVDTSEMVNGAAEQRTSS
KESSPIPSPTSERKAKTALPAQSAATLPARTQETPLAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactacgacaacatcgagatccaacagcagtacagcgat
gtcaacaaccgctgggacgtggatgactgggacaacgagaacagctccgcgcggctcttt
gagcggtcccgcatcaaggctctggcagatgaacgtgaagccgtgcagaagaagaccttc
accaagtgggtcaactcccacctcgcccgggtgtcctgccggatcacagacctgtacact
gacctccgggatggacggatgctcatcaagctgctggaggtcctctccggagagagactg
cctaaacccaccaagggacgaatgcgcatccactgtctggagaacgtggacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatggggtcccacgacatcgtggat
gggaaccaccggctgaccctcggccttatctggaccatcatcctgcgcttccagatccag
gatatcagcgtggaaactgaagacaacaaagagaagaaatctgccaaggatgcattgctg
ttgtggtgccagatgaagacagctgggtaccccaacgtcaacattcacaatttcaccact
agctggagggacggcatggccttcaatgcgctgatacacaaacaccggcctgacctgata
gattttgacaagctaaagaaatccaatgcacactacaatctgcagaatgcatttaacctt
gcagagcagcacctcggcctcactaaactgttggaccccgaagatatcagtgtggaccac
cccgatgagaagtccattatcacttatgtggtgacttattaccactacttctcaaagatg
aaggccttggctgttgaaggaaaacgaattggaaaggtgctcgacaatgctattgaaaca
gaaaaaatgattgaaaagtatgaatcccttgcctctgaccttctggagtggattgaacaa
accatcattattttgaacaaccgcaaatttgccaactcgctggttggggttcaacaacag
ctccaggccttcaacacctaccgcactgtggagaagccgcccaaatttactgagaagggg
aacttggaagtcctgcttttcactattcagagcaagatgagggccaataaccagaaggtc
tacatgccccgggaggggaagctcatctctgacattaacaaggcctgggaaagactggaa
aaagcggaacatgagcgagaactggccctgcggaacgagctcataagacaggagaaactg
gaacagctcgcccgcagatttgaccgcaaggcagctatgagggaaacctggctgagcgag
aaccagcgtctggtgtcccaggacaactttggatttgaccttcccgcagtcgaggctgcc
acgaaaaagcacgaggccattgagacggacattgccgcgtacgaggagcgcgtgcaggcc
gtggtggccgtggccagggagctggaagcggagaactaccacgacatcaagcgcatcgcg
gcgaggaaggacaacgtcatccggctctgggagtacctgctggagctgctcagggcccgg
cggcagcgcctcgagatgaacctggggctgcagaagatattccaggaaatgctctacatt
atggactggatggatgaaatgaaggtgctattattgtctcaagactatggcaaacacttg
ctcggcgtggaagacctgttacagaagcacgccctggttgaagcggacattggcatccag
gcagagcgggtgagaggtgtcaatgcctccgcccagaaatttgcaacagacggggaaggt
tacaagccctgcgacccccaggtgatccgagaccgcgtggcccacatggagttctgttat
caagagctttgccagctggcggccgagcgccgggcccgcctggaagagtcccgccgcctc
tggaagttcttctgggagatggccgaggaggaaggctggatccgggagaaggagaagatc
ctgtcctccgacgactacggcaaggacctcaccagtgtcgtgcggctgctcagcaagcac
cgggcgttcgaggacgagatgagcggccgcagcggccacttcgagcaggccatcaaggag
ggcgaagacatgatcgccgaggagcacttcgggtcggagaagatccgggagcggatcgcc
tacattcgcgagcagtgggcccacctggagcagctctcggccatccgcaagaagcgcctg
gaggaggcctcgctgctgcaccagttccaggcggacgccgacgacatcgacgcctggatg
ctggacatcctcaagatcgtctccagcagcgacgtgggccacgacgagtactccacccag
tccctggtcaagaagcacaaggacgtggcagaggagatcgccaactaccggcccaccatc
gactcgctgcacgagcaggccggcgccctcccccaggagcatgccgagtctcccgacgtg
cagggccgactggcgggcatcgaggagcgctacaaggaggtggccgagctgacgcggctg
cggaagcaggcgctgcaggacaccctggccctgtacaagatgttcagcgaggccggcgcc
tgcgagctctggatcgacgagaaggagcagtggctcgacaacatgcagatcccagagaag
ctggaggacctggaggtcatccagcacagattcgagagcctagagccagagatgaacaac
caggcttcccgggtggcggtggtgaaccagatcgcccggcagctgatgcacagcggccac
ccgagcgagaaggagatcaaggcccagcaggacaagctcaacacgaggtggagtcagttc
agggagctggtggaccggaagaaggacgctctcctctccgccctgagcatccagaactac
cacctcgagtgcaacgaaaccaagtcctggattcgggaaaagaccaaggtcatcgaatcc
acccaggacctgggcaacgacctggcaggagtcatggccctgcagcgcaagctgaccggc
atggagcgggacctggtggccatcgaggcaaagctgagcgacctgcagaaggaggccgag
aagctggagtcggagcaccccgaccaggcccaggccatcctgtctcggctggccgagatc
agcgacgtgtgggaggagatgaagaccactctgaagaaccgcgaggcctccttgggagag
gccagcaagctgcagcagttcctgcgggacctggacgacttccagtcctggctctccagg
acccagacggccatcgcctcggaggacatgcccaacaccctgaccgaggctgagaagctc
ctcacgcagcacgagaacatcaaaaacgagatcgacaactatgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggccagaccgacgcccagtacatgttcttg
cggcagcggctgcaggccctggacactgggtggaatgagctccacaagatgtgggagaac
aggcagaaccttctctcccagtcccacgcctaccagcagttcctgcgggacacgaagcag
gccgaagccttcctgaacaaccaggagtatgttttggcccatactgaaatgcccaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggacgcc
aacgaggagaagatcaatgcggtcgtggagacgggccggaggctggtgagcgatgggaac
atcagttcggaccgcatccaggagaaggtggactctatcgatgacagacacaggaagaat
cgtgaggcagccagtgagcttctgatgagactgaaggacaacagggatcttcagaaattc
ctgcaagattgtcaggagctgtctctctggatcaatgaaaagatgctcacagcccaggac
atgtcttatgatgaagccagaaatctgcacagtaaatggttaaaacatcaagcctttatg
gcagaactcgcatccaacaaagagtggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagccagagacggaagccgtggtgaaggagaaactcacaggtttacataaa
atgtgggaagtccttgagtctaccacgcagaccaaggcccagcggctcttcgacgcaaac
agagctgaactcttcacccagagctgtgcagatctggacaaatggctgcacggcctggag
agtcagattcaatctgacgactatggcaaagacctcaccagtgtcaacatcctgctgaaa
aagcaacagatgctggagaatcagatggaggtgcggaagaaggagatcgaagagctccag
agccaggcgcaggccctgagccaggaggggaagagcacggacgaggtggacagcaagcgc
ctcaccgtgcagaccaagttcatggcgctgctggagcccctgaatgagaggaagcagaac
ctgctggcctccagagagatccatcagttcaacagggacgtggaggacgagatcttgtgg
gttggagagaggatgcctttggcaacttccacggatcacggccacaacctccagaccgtg
cagctgttaataaagaaaaatcagaccctgcagaaggagatccagggccaccagccccgc
atcgacgacatctttgagaggagccagaacatcgtcacggacagcagcctcaacgccgag
gccatccggcagaggctggccgacctgaagcagctgtggggcctcctcatcgaggagacg
gagaagcggcaccggcggctggaggaggcgcacaaggcccagcagtactacttcgacgcg
gccgaggccgaggcgtggatgagcgagcaggagctgtacatgatgtccgaggagaaggcc
aaggatgagcagagcgccgtctccatgttgaagaagcaccagattctggaacaagccgtg
gaggactacgcggagacggtgcatcagctctccaagaccagccgggccctggtggctgac
agccatcccgaaagtgagcgcatcagcatgcggcagtccaaagtggacaagctgtatgcg
ggcctcaaggacctggccgaggagaggaggggcaagctggacgagaggcaccggctgttc
cagctcaaccgggaggtcgacgacctggagcagtggatcgccgagagggaggtggtcgca
gggtcacacgagctggggcaggactacgagcacgtcacgatgctacaagaacgattccgg
gaatttgcccgggacacagggaacattgggcaggagcgcgtggacacggtcaatcacatg
gcagatgaactcatcaactctggacactcggatgccgccaccatcgccgagtggaaggac
gggctcaacgaagcctgggctgacctcctggagctcatcgacacgaggacgcagatcctc
gctgcctcctatgaactgcacaagttttaccatgatgccaaggagatctttgggcgcatc
caggacaagcacaagaaactccccgaggagcttgggagagatcagaacacagtggagacc
ttacagagaatgcacaccacgtttgagcacgacatccaggctctgggcactcaggtgaga
cagctgcaggaggatgcagcccgcctccaggccgcctatgcgggcgacaaggccgaggac
atccagaagcgggagaacgaggtcctggaagcctggaaggccctgctggacgcctgcgag
ggccgcagggtgcggctggtggacacgggggacaagttccgcttcttcagcatggtgcgc
gacctcatgctgtggatggaggatgtcatccggcagatcgaagcccaggagaagccacgg
gatgtgtcctctgttgaactattaatgaataatcatcaaggtatcaaagcagaaatcgat
gctcgtaatgacagtttcacgacctgcattgaacttgggaaatcgctgctggcgaggaag
cactacgcatcagaggagatcaaggagaagttactgcagttgacggaaaagaggaaagaa
atgattgacaagtgggaagaccgatgggaatggttaagactgatcttggaggtccatcag
ttctcaagggacgccagtgtggccgaggcctggctgctcggacaggagccctacctgtcc
agccgagaaataggccagagcgtggacgaggtggagaagctcatcaagcgccacgaggct
tttgaaaagtctgcagcgacctgggacgagaggttctccgccctggaaaggctgacgaca
ttggagctactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggccgcct
tctcctgagccgagctcgaaggtttccgaggagaccgagtcccagcagcagtgggatgct
tcaaaaggagagcaagtttcccagaatggtttgccggctgaacagggatctccacggatg
gcagaaacggtggacacgagcgaaatggtcaatggcgctgcagaacagaggacaagctcg
aaagagtccagccccatcccctctcccacctccgagcgcaaagccaagactgccctcccg
gcccagagtgctgccaccttgccggccaggacccaggagacgcctttggcccagatggaa
ggcttcctgaatcggaagcacgagtgggaggcccacaataagaaggcctcaagcaggtcc
tggcacaatgtttactgtgtcataaataaccaagaaatgggtttctacaaagatgcaaag
acagctgcttccggaattccctaccacagcgaggtccctgtgagtttgaaagaagccatc
tgtgaagtggcccttgattacaaaaagaagaaacacgtgttcaagctaagactaaatgac
ggcaatgagtacctcttccaagccaaagacgatgaggaaatgaacacatggatccaggcc
atctcctctgccatctcctccgataaacacgaggtgtccgccagcacccagagcacgcca
gcatccagccgggctcagaccttgcccaccagcgttgtcaccatcaccagcgagtccagt
cccggcaaacgggagaaggacaaagagaaagacaaagaaaagaggttcagcctttttggc
aaaaagaagtga
DBGET
integrated database retrieval system
