Stenella coeruleoalba (striped dolphin): 307196635
Help
Entry
307196635 CDS
T11893
Symbol
THOC5, ACYUVP_021908
Name
(RefSeq) THO complex subunit 5 isoform 2
KO
K13174
THO complex subunit 5
Organism
scoo Stenella coeruleoalba (striped dolphin)
Pathway
scoo03013
Nucleocytoplasmic transport
scoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
307196635 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
307196635 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scoo03019
]
307196635 (THOC5)
03041 Spliceosome [BR:
scoo03041
]
307196635 (THOC5)
Messenger RNA biogenesis [BR:
scoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
307196635 (THOC5)
Spliceosome [BR:
scoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
307196635 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
307196635
NCBI-ProteinID:
XP_079797872
LinkDB
All DBs
Position
14:<67463257..67492502
Genome browser
AA seq
730 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRNRSDIEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAIEIEDRKIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKVEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLRCKEHRLR
TRRLSGHGSRAQPLHGMWDLPGPGHELVSPASAGGLSTTAPPDDSVLHLTFYYLMNLNIM
TVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQYQFDKVGILTLRDY
VLDLGHPYLWVQKMGGLHFPKEQPQHTVITDHSLSASHMETTMKLLKTRVQSRLALHKQF
ASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIPHEDYTELHFTKDIMEAGLAGDTNLYYM
ALVERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGEKTNNNDDNIRAMESEVNVCYKELC
GPWPGHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLRLFRGPSRMKPFKY
NHPQGFFSHR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaatcgagcaaaaaacgaaagcccaaagtgatccgaagtgatggagctcca
gctgaagggaagcgtaatcgttctgacattgaacaggaaggtaaatactacagcgaggag
gctgaggtggacctgcgggaccctggcagagactatgagctgtacaagtacacgtgccag
gagttgcagaggctcatggcagagatccaggacctgaagagcaggggaggcaaggatgtg
gcaattgagatcgaagatcggaagatccagagctgtgtgcatttcatgactctaaaaaag
cttaaccgattagcccacatcaggttgaagaaaggaagagatcagactcatgaggccaag
cagaaagtggacgcctatcacctgcagctccagaacctgttgtatgaggtgatgcacctg
cagaaggagatcaccaaatgtctggagtttaagtcaaagcacgaagaaatcgatctggtc
agcttagaggagttttataaggaggctcctccagatatcagcaaggtggaagtcaccatg
ggagaccctcaccagcaaacccttgcacgtctggactgggagctggagcagcggaaaagg
ctggcggagaagtaccgagagtgcctgtccaacaaggagaagatccttaaggagattgaa
gtaaagaaggagtacctgagtagcctccagcctcgtctcaacagcatcatgcaggcttcc
ctaccggtgcaggagtatctgtttatgcccttcgaccaagctcacaagcagtatgagaca
gcccgacacctaccacctcccctctatgtcctctttgtccaggccactgcgtatgggcaa
gcctgtgataagacgttgtctgtggcgattgaaggcagcgtggatgaggccaaggctctg
ttcaagcctcccgaggactcccaagatgacgagagtgactcggatgctgaggaggagcag
accacgaaacgccggcgacccacactgggagttcagctggacgacaagcgcaaggagatg
ctgaagaggcacccgctgtccgtcatgctggacctgaggtgcaaagagcacaggctccgg
acgcgcaggctcagcggccatggctcacgggcccagccgctccacggcatgtgggatctt
cccggaccggggcacgaactggtgtcccctgcatcggcaggcggactctcaaccactgcg
ccaccagatgacagtgtactgcacctgactttctactacctcatgaacctcaacatcatg
acggtaaaagccaaagtgacaactgccacagaactgatcacccccatcagtgcaggtgac
ttgctgtctcctgactcagtactgagctgtttgtatcctggggatcatggaaagaaaact
ccaaatccagccaatcagtatcagtttgataaagttggcatcctgactttgagggactac
gtacttgacttagggcatccctatttgtgggtgcagaagatgggtggcctccacttcccc
aaagagcagccccagcacactgtgatcactgaccactctctgagcgccagccacatggag
accaccatgaaactgctgaagaccagggtgcagtcccgcttggccctccacaagcagttt
gcctccctggaacacggcattgtgccagttaccagtgactgccagtacctcttccctgca
aaggttgtctctcgcctggtgaagtgggtgacgattccccatgaggattatacggaactg
cattttaccaaagacatcatggaggcgggactggctggggacaccaatctctactatatg
gcactcgtggaaaggggcacagctaagctccaggctgccgtggtgctgaaccccggctac
tcctccatcccacccattttccagctctgtctgaactggaaaggggagaaaaccaacaac
aacgacgacaatattcgggccatggagagtgaagtcaatgtgtgctacaaggagctgtgt
ggcccctggcccggccaccagctcttgacgaaccagctgcagcgcctgtgcgtgctgctg
gatgtctacctggagacggagagccacgacgacagcgtggaggggcccaaggaatttccc
caggagaaaatgtgtctgcggcttttcaggggccccagcaggatgaagccatttaaatat
aaccatcctcaaggattcttcagccatcgctga
DBGET
integrated database retrieval system
