Sulfidibacter corallicola: J3U87_05405
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Entry
J3U87_05405 CDS
T07864
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scor
Sulfidibacter corallicola
Pathway
scor03030
DNA replication
scor03430
Mismatch repair
scor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J3U87_05405
03430 Mismatch repair
J3U87_05405
03440 Homologous recombination
J3U87_05405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scor03032
]
J3U87_05405
03400 DNA repair and recombination proteins [BR:
scor03400
]
J3U87_05405
Enzymes [BR:
scor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J3U87_05405
DNA replication proteins [BR:
scor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J3U87_05405
DNA repair and recombination proteins [BR:
scor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J3U87_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QTD51889
UniProt:
A0A8A4TPJ3
LinkDB
All DBs
Position
complement(1861102..1864107)
Genome browser
AA seq
1001 aa
AA seq
DB search
MHPATDFQHLHVHSNYSLMWGTAPIEGLARHLRENGQRFFPLTDRNGLYGLVDHLQLCRE
YELEPIIGCELVTKDHQALCLVKTRQGYQNLCHMLTDQYHEPSWKLPRALRDHYEGLVVI
TQDDDVLHAIHDTAEVYIDLWPGDTTRTRACHRKWKLPLVATAHAYTVSSRAYPLHLMLR
AIDTNSKLSRLPPGGFMPRASYLASPEEMCARFETEPQALARTVEIAEACTFTPTIGELI
FPPSEYDENFKILREKTYAGLARRYERLTPTITRRADYELDMIRRKNFSNCFLVIEDVVS
RFSLTCGRGSAAASIVSFALGITHVDPIAHNLFFERFLNPGRKDPPDIDIDFAWDERDRV
RDYLWGKYGGAHIAMVCNHNRMQARSAVREMAKVYGLGDKEIAKMAHHLLQLKRSPKHKD
TRPTDLPDPWPDILAMARRLEGFPRHISVHCGGVVITPDPITHHCPLRPMPIGYDVVPWD
KDGVEDYGFVKLDFLGNRSLAVIRDCLQSVRENYRVDIRYDTLNPIDDPQTQTLIREGNT
MGCFYVESPATRQLLQKVRMGDYETLVAVSSIIRPAANVISAEWVRRHRWMHDEQGRPRP
NRKPNWRPIHPDLEEVLAETHGLMVYQEDVTRTAMALAGFNACDGDRLRKIISKKDKQKV
LRDYHARFIEGCRANGLADERIQDIWDMILSFAGYSFCKPHSASYAMVSFKSAFLKFHYP
AEFMAAVISNQGGFYSAHAYLSHARRNGLEVLGPDINDSRVTYRGYRGRIRIGFMQIKGL
KRETGERILKARQDGLFHDFGDFMFRVRPSLEEAKRLILAGCFDRLEPDLNRPSLIWRAL
HWHALHRRQSEDLFPEPIRVEDLPRMEDYDRRTKLALERRLLGFLISCHPLELYREALER
VPRIAATELPRQVGRKVTLAGWLVTGKTVRTKHDEPMSFLTFEDESGLFETVLFPEPFAQ
FAACLDYANAYILRGEVTSDMGAISVTLQEVIRLSPQTAGS
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgccaccgattttcagcacctgcacgtccacagcaactattcactgatgtgg
ggaaccgcccccatcgaggggctggcccgacacctgcgcgaaaacggccagcgtttcttc
ccgctgaccgaccgcaacggcctctacgggttggtcgaccacctgcaattgtgtcgcgaa
tacgaattggagccgatcatcggctgcgaactggtgacgaaggaccatcaggcgctgtgc
ctggtcaagacccgtcagggttaccagaacctctgccacatgctcaccgaccagtaccac
gaaccgtcctggaagctaccccgtgcgctgcgcgaccattacgagggcctcgtcgtcatc
acccaggacgacgacgtgctgcacgcgatccacgacacggccgaagtctacatcgatctg
tggccaggagatacaacccgcacgcgggcctgccatcgcaagtggaagctgccgctggtg
gccaccgcccacgcctacaccgtttcgtcgcgcgcctatccgctgcacctgatgctgcgc
gccatcgacaccaacagcaagctgtcgcgcctgccgccgggcggcttcatgccgcgcgcg
agctatctggcctcgccggaggaaatgtgtgcacgcttcgagaccgaaccgcaggccctg
gcccgcaccgtcgaaatcgccgaggcctgcaccttcacgcccaccatcggcgagctgatc
tttcccccctcggagtacgacgagaacttcaagatcctgcgcgagaagacctatgccggc
ctggcccggcgctacgaacgactcacgcccaccatcacccggcgcgccgactacgaactc
gacatgatccgccgtaaaaatttctccaactgctttctcgtcatcgaagacgtcgtcagc
cgcttctcgctgacctgcggtcgcggcagcgccgcggccagcatcgtgtccttcgcgctc
ggcatcacccacgtggaccccatcgcccacaacctgttcttcgaacgctttctgaacccc
ggccgcaaggacccgcccgacatcgacatcgacttcgcgtgggacgagcgcgatcgcgtg
cgcgactacctctggggcaaatacggcggggcccacatcgcgatggtctgcaaccacaac
cgcatgcaggcccgctcggcggtgcgcgagatggccaaggtctacggactgggcgacaag
gagatcgccaagatggcccaccacctcctccagctcaagcgttcgccgaagcacaaggac
acgcgccccacggacctgcccgacccctggcccgacatcctcgccatggcccgccgcctg
gaaggctttccccgccacatcagcgtccactgcggcggcgtggtcatcacacccgacccc
atcacccaccactgtccgctgcgccccatgccgatcggctacgacgtggtgccctgggac
aaggacggggtcgaagactacggcttcgtcaaactcgacttcctgggcaaccgctcgctg
gccgtgattcgcgactgcctgcaatcggttcgcgaaaactatcgcgtcgacatccgctac
gacaccctgaaccccatcgacgatccccaaacccagaccctgatccgcgagggcaacacc
atgggctgcttctacgtggaatcccccgcgacccgtcaactgctgcagaaggtgcgcatg
ggcgactacgaaacgctggtcgccgtctcctcgatcattcgccccgccgccaacgtgatt
tccgccgagtgggtgcgccgccaccgctggatgcacgacgaacagggacgcccgcgcccg
aaccgcaaacccaactggcggccgatccatcccgatctcgaggaggtcctggcggagacc
cacgggctgatggtctaccaggaggacgtgacgcgcacggccatggcactggccggcttc
aacgcctgcgacggcgaccgcctgcgcaagatcatcagcaagaaggacaaacagaaggtg
ctgcgcgactatcacgcccgcttcatcgaaggctgccgcgccaacggtctcgccgacgag
cgcattcaggacatctgggacatgatcctctcgttcgccggctactctttctgcaagccc
cattcggcatcctacgcgatggtcagcttcaagtcggccttcctcaaattccactatccg
gccgaattcatggccgccgtcatttccaatcagggcggcttctactccgcgcacgcctat
ctgtcacacgcccgtcgcaacgggctcgaggtgctcggtcccgacatcaacgacagccgc
gtgacctatcgcggctatcggggccgcattcgcatcggtttcatgcagatcaagggtctc
aagcgcgaaaccggcgagcgcattctgaaggcgcgtcaggacgggctgtttcacgacttc
ggcgatttcatgttccgcgtacgtccctcgctggaagaggccaagcgcctgattctcgcc
ggttgcttcgaccgcctcgagccggacctcaaccgaccctcgctcatctggcgggcactg
cactggcacgccctacaccggcgccagagcgaggatctgtttcccgaaccgattcgggtc
gaggatctgccgcgcatggaagactacgatcggcgcaccaaactcgcgctggaacggcgg
ctgctgggcttcctgatttcctgtcatcccctggaactgtaccgcgaagcgctggaacgc
gtgccgcgcatcgccgccacggagctgccgcgccaggtcggccgcaaggtgacgctggcg
ggttggctggttacgggaaagacggtgcgcaccaaacacgacgaacccatgagctttctc
accttcgaggacgagagcggtctgttcgaaaccgtcttgtttcccgaacccttcgctcag
ttcgccgcttgtctcgattacgccaacgcctatattctgcgtggtgaggtaacttcggac
atgggggcgatctcggtcaccctgcaggaggtcattcgcctctcaccccagaccgcgggc
tcgtga
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