Sulfidibacter corallicola: J3U87_07695
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Entry
J3U87_07695 CDS
T07864
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
scor
Sulfidibacter corallicola
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scor03400
]
J3U87_07695
DNA repair and recombination proteins [BR:
scor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J3U87_07695
Archaeal homologous recombinant proteins
J3U87_07695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_ATPase
nSTAND3
ABC_tran
AAA_22
RsgA_GTPase
cobW
DUF87
Motif
Other DBs
NCBI-ProteinID:
QTD52343
UniProt:
A0A8A4TS51
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All DBs
Position
complement(2634104..2637883)
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AA seq
1259 aa
AA seq
DB search
MKILAIRGANLTSIAGSFAVELNAEPLNETGLFAITGPTGAGKSTLLDALCVSLFNKIPR
LENLGRGVEIGHEGGDRLNHADPRNLIRRGAPKGHAETEFVGVDERIYRARWWVERVSRG
ATKGILKKVEMSLVDVAAEQTLGRTLTETLHLIEGKIGLAFAQFRRSVLLAQGDFAAFLK
ADTGERSDLLERMTGTDIYSRLSVRCHERARAEEDAENLLREKLDFHEVMDDATRTDALL
ARDQAKSGLERSQEREKELDRAERWLAQTEKLEEEEARARTEAALAEEALAATADIQEEW
AQYRRIQTLRPLRDRHDRARELLDRTEIACAEAIAARDRQRTAHQAAETEKAAAQVTWSE
ARNRLIKIKPELARAAELDAAIDRTAGDLTEARHSLEKVETEATRKRAELAELDAAKDRL
LECLAQAESWFAQNEEIGLLAGQWTRWHDELDRYHKAHVAAADASHALAEMKRRAETFAE
RERELNQAHAAATADLDALRRRLGEAERALEDIDATDLPEQRKALLQARDRLAEARRQRT
ELLRCKQARERAGKAYDELVARGKKARVELESCRAACERLAVRHNEARDTLDRLKLAAGS
DVRDLRATLVEGQPCPVCGAAEHPYASEAPAHRILGEQVARVRELEATLNRETEKRSHAE
AEIKLMRTEAQRSKQDLESLQEEESQAMTRWGAAHQAVAIESLPEDPGSPDCESLLVARG
TRIDDQLDALDRREHRLKAARKDLSDLQALCDKQRAKRDQIAEASQKAVQNRLEEKSISS
AKEREVLHAEQLKRDLSAVLAKPLAWVSDLEARLGADPLEVRETAESRAVAWHRVEREAA
DHRVKLQEIDPHRQRLVTDLTSLRDREQLWRQKVTEAQTALEAQRAQRAELLDGKPTVEV
AEALEGAEQRAADHLERIKRGEEHAARELAVLERRAHDLEAQRGEQAEALDEAAAAWNEA
LSDAPHPEPRIREWLDQDPASWEAKRTRIETRQQAHQAAQVRLQERAHQLEKHAAQRPPH
LDQASEEPSNPLSLKEVRETLEQTRQDRADREQAFYQFKHRLERDDEIRAGKRDLQEAYT
RQCERTGLWKAMKDLIGSSTGKKFRQYAQSLTLDALLGYANRHLEDLARRYQLQRVPHIE
SLELQILDRDMGDEIRSVNSLSGGESFLVSLALALGLASLSAETTQVESLFIDEGFGALD
PESLDLAINALDSLQATGRQVGVISHIPTLIERIGTRVVVRPLGSGRSRIQVTSAFEAG
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttgccattcgcggtgcgaacctgaccagtatcgccggttccttcgcggtc
gaactcaacgccgagcccctcaacgagaccggcctgttcgccatcacgggacccaccggg
gccgggaaaagcaccttgctggacgcgctttgcgtcagcttgttcaacaagattccgcgc
ctggaaaacctgggccgcggtgtggaaatcggccacgagggcggcgaccgcttgaaccat
gccgatccccgcaacctgattcggcgcggtgcgcccaaaggccacgccgagaccgaattc
gtgggtgtcgacgagcgcatctaccgcgcccgatggtgggtggagcgcgtctcgcgaggc
gcgaccaaggggatcctgaaaaaggtggaaatgagcctggtcgacgtggccgccgagcaa
accctggggcgcacgctcacggaaacgctgcacctcatcgaaggcaaaatcggactcgcc
ttcgctcagttccgtcgctcggtcctgctggctcagggtgacttcgctgcctttctgaaa
gccgacacgggcgagcgctccgacctgctggagcgcatgaccggcacggatatctattcg
cggctctcggtcaggtgccacgagcgggctcgggccgaggaggacgccgagaacctgttg
agggagaagctggatttccacgaggtcatggacgacgcgacacggaccgacgcgctcctg
gcgcgcgaccaagccaagtccggattggaacggtcccaggaacgggaaaaggaattggac
cgggcggaacggtggctggcccagacggagaagctggaggaggaagaggcgcgggcccgg
accgaggccgccctggcggaagaagcgctggccgccacggccgacatccaggaggaatgg
gcgcagtaccggcgcattcagacgttgcgccctctgcgcgaccgccatgaccgggcgcgc
gagctcttggaccggaccgaaatcgcctgcgccgaagctatcgccgcgcgcgatcggcaa
cgcaccgcgcatcaggcggccgaaacggagaaagcggcggcccaggtcacctggagcgag
gcgcggaatcgcctgatcaaaatcaaaccggaacttgcgcgcgcggccgagctggacgcc
gccatcgatcgaacggccggcgatctgaccgaggcacgccattcactcgagaaggtcgaa
acggaggcgacgcgcaagcgagccgagttggccgagctggatgctgcgaaggatcgcttg
ctggagtgtctggcccaagccgaatcgtggtttgcccagaacgaagagatcgggttgctg
gccgggcagtggacgcgctggcacgacgaactggaccgctaccacaaggcccacgtggcg
gcggccgatgcctcgcacgcactcgccgaaatgaaacgtcgcgcggagaccttcgccgaa
cgggaacgcgagctgaaccaggctcatgccgcggccacggcggatctggacgcactgcgg
cgacggttgggcgaggccgaaagagcgctggaggacatcgatgcgaccgatttgccggag
cagcgcaaagccctgttgcaggcccgggacaggcttgccgaggctcgccgacagcggacc
gaactgttgcggtgcaagcaggctcgggagcgggccggcaaggcctacgacgaactcgtc
gcccgtggaaaaaaagcgcgggtagaactcgaaagctgccgggccgcctgcgaacggctc
gccgttcgccacaacgaggctcgcgacaccttggatcgtttgaagctcgcggccggcagc
gatgtgcgcgacctgcgcgccaccctggtggaaggtcagccctgcccggtctgtggtgcc
gccgagcatccctacgccagcgaggcgcccgcgcaccggatcctcggcgagcaggtcgcc
cgagtgcgcgagctggaagcgaccctgaaccgggaaaccgaaaagcggagccacgccgag
gccgaaatcaaactgatgcggaccgaagcgcaaagatcgaaacaggatctggagtcgctc
caggaagaggaaagccaggcgatgacgcgatggggtgcggcccaccaggcggtggccatc
gaatctctgccggaagatcccggctcgcccgattgcgagagcctgttggtcgcacgaggt
acgcgcatcgacgaccagctcgatgcgctcgatcggcgcgaacaccgattgaaagcggcg
cgcaaggacctttccgatctccaggcgctttgtgacaagcaacgagccaagcgtgaccag
atcgcggaggcatcccaaaaagcggtccaaaacaggttggaggaaaagtccatttcgagc
gccaaggaacgcgaggttctccatgcggagcagttgaaacgcgacctgtcggcggtgttg
gcgaagccgctggcctgggtctccgatctcgaggcgcgcctgggtgcggacccgctcgag
gtgcgtgaaacggccgagtcgcgcgccgtcgcgtggcatcgcgtggagcgagaagcggcg
gatcatcgagtcaagcttcaggagatcgacccccatcgccagcgtttggtcaccgacctg
acgtcgcttcgggatcgcgaacagctttggcggcagaaggtcaccgaggcccaaaccgcg
ctcgaggcccagcgtgcacagcgcgccgaattgctggatggcaagcccaccgtggaggtg
gccgaagcgttggagggagccgaacagcgagcggcggatcacttggagcggatcaagcga
ggcgaggaacacgcggcgcgcgagctggcggtcctcgaacgacgggcgcacgatttggaa
gcgcaacgcggcgaacaggcagaggccctcgatgaggccgcggccgcatggaacgaggcg
ttgagcgacgcaccgcacccggagccgcgtattcgggaatggctcgatcaggatccggcg
tcctgggaagcgaagcgcacccgcatcgagacccgccagcaagcccaccaggcggcccaa
gttcgcttgcaggagcgagcccatcaactggagaagcacgcggcgcagcgtccgccgcat
ttggatcaggcatccgaagagccgtccaaccctctgtctttgaaggaggttcgcgaaacc
ctggagcagacgcgtcaggaccgagccgaccgagagcaggccttttaccaattcaaacac
cgtctcgagcgggatgacgagatccgcgcgggcaagcgggatcttcaagaagcgtacacg
cgccaatgtgagcgaacggggctgtggaaggcgatgaaggatctgatcggcagttccacc
ggcaaaaagttccgccaatacgcgcagagtctcacgctggatgccctgctgggttacgcc
aaccgccatttggaggacctggctcggcggtaccagctccagcgggtgccccacatcgag
agcttggagctgcaaatcctggatcgcgacatgggtgacgagatccgaagcgtcaacagc
ctgtcgggcggcgagagtttcctggtgtcgctggcgttggcgttggggttggcgtcgtta
tccgcggaaacgacccaagtcgaaagcctgttcatcgacgagggattcggcgcgctggat
cccgagagcctggatttggcgatcaacgcgctggacagcttgcaggcgacgggccgccaa
gtgggggtcatttcgcacatcccgacgttgatcgagcgaatcggtacgcgggtggtggtg
cggccattgggaagcggtcgaagtcggatccaggtgacgtcggccttcgaggcgggctga
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