Sulfidibacter corallicola: J3U87_09330
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Entry
J3U87_09330 CDS
T07864
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scor
Sulfidibacter corallicola
Pathway
scor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J3U87_09330 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scor03400
]
J3U87_09330 (mutM)
Enzymes [BR:
scor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
J3U87_09330 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J3U87_09330 (mutM)
DNA repair and recombination proteins [BR:
scor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J3U87_09330 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn-ribbon_8
OrfB_Zn_ribbon
Zn_Tnp_IS91
RNHCP
Motif
Other DBs
NCBI-ProteinID:
QTD52664
UniProt:
A0A8A4TU48
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Position
complement(3285580..3286392)
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AA seq
270 aa
AA seq
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MPELPEVETVVRGLAPDLIGRKVVSVWTDWPRALDGSEPHLMESALDGRPLQRIFRRAKY
ICLDFGGIYVVVHLRMTGRLYLSPNRSGDDRWVHVSLGLDDDRYLAFSDSRKFGRVSLCD
SLDFLERKLGPEPLEMSDDAFSNLFRGSTRAIKTFLLDQSKIAGIGNIYADEALLRAGIH
PLTPVDRIPHNRARRLGQTIREVLDAAINYEGASISWYRKPDGSQGESQKHFWAYGRTHQ
PCKVCGTTIERIVVGQRSTHFCPKCQKKPR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcccgaagtcgaaaccgtcgtccgtggcctggctcccgacctgatcggt
cgaaaagtggtttcggtttggaccgactggccccgtgcgctcgacggaagcgagccccat
ctcatggaatcggccctggacggtcgcccgctgcagcgcatctttcgacgagccaaatac
atctgtctcgatttcggcggtatctacgtcgtggtccatctgcgcatgaccggacgcctg
tacctgagtccgaaccgctcgggtgacgaccgttgggttcatgtttcgctcggcctcgac
gacgaccgctacctggctttttccgactcgcgcaagttcgggcgcgtcagcctgtgtgac
tctctcgattttctcgaacgcaagttgggtccggaacccttggagatgagcgacgatgcg
ttttccaacctgtttcgcggctccacccgggccatcaagacctttctgttggatcaaagc
aaaattgccgggatcggcaacatctacgccgacgaggccctgttgcgggcgggcattcat
cccttgacgccggtcgaccggattccccacaaccgggcccggcgcctggggcagaccatt
cgcgaggtcttggatgcggccatcaactacgagggggccagcatcagttggtatcgcaaa
cccgacggaagccagggcgagagtcaaaagcacttttgggcctatggtcgcacccaccaa
ccctgcaaagtgtgcggcaccaccatcgaacgtatcgtcgtgggtcaacggtcgacccat
ttctgtcccaaatgccaaaaaaagccccgctga
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