Sulfidibacter corallicola: J3U87_09950
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Entry
J3U87_09950 CDS
T07864
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
scor
Sulfidibacter corallicola
Pathway
scor02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J3U87_09950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scor03000
]
J3U87_09950
Transcription factors [BR:
scor03000
]
Prokaryotic type
Helix-turn-helix
Other families
J3U87_09950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
HTH_8
AAA_2
AAA
Mg_chelatase
HTH_50
GAF_3
AAA_16
AAA_3
nSTAND3
RsgA_GTPase
bpMoxR
DUF815
DUF3631
Motif
Other DBs
NCBI-ProteinID:
QTD52787
UniProt:
A0A8A4TTU0
LinkDB
All DBs
Position
3469718..3471283
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AA seq
521 aa
AA seq
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MNQPAVNSTQDPKLEQVMQSRVLDPNDYFESVVGPVLHIIGQFMGKSRVALSLPDPDTGE
LVMQTVYGLTVEQQKRGRYKIGEGITGKVFQTGEAVRILNVRDEPEFLDRVMGHGLEPVE
NKAFICVPIKMEKQVIGTLSAVCDIPDSKTLEEDERLLSIIASLVVQAVKLRDRALEDRK
HLIEENLRLTEQLRDRYRPANLIGTSKVMSEVYQQIRQVSQSEATVMLLGESGVGKELVA
HAIHYESNRANGPFIKVNCAALPESVLESELFGHERGAFTGAIKTRKGRFEQAHGGTLFL
DEIGDFSPAIQVTLLRILQEKELERVGGDRTIKVDVRIIAATNRDLESLMEQGKFRQDLY
YRLNVFPIHIPPLRERKTDIPLLCDHFIEKYNKINGKNIQRLSSSAIDMLMSYHWPGNVR
ELENCMERAVLLSQNDVIRTIDLPPTLQTADATHTKTEGTLETALQRMERELIMDALIST
HGNMAKAAKILGLTERKMGLRVKRYNINPKNIRAKGYHTKM
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcccgcagtcaattcaacccaggatccaaagctcgaacaggtcatgcagagc
cgtgtactcgacccgaacgattacttcgaaagtgtcgtcggaccggtgctgcacatcatc
gggcaattcatgggtaaatctcgggtggcgctttcgctacccgatcccgatactggcgaa
ctggtgatgcagaccgtgtacggtctcaccgtcgaacagcagaaacggggtcgctacaag
ataggcgagggcattaccggcaaggtgtttcaaaccggtgaagcggtacgaattctcaac
gtccgggacgaaccggagtttttggaccgggtcatgggccacggtctcgaacccgtcgag
aacaaggccttcatctgcgtgcccatcaagatggaaaagcaagtgatcggaaccctgagc
gccgtctgcgacattcccgacagcaagacgctcgaggaagacgagcgcctgctgtcgatc
atcgcatcgttggtcgttcaggccgtcaagttgcgggatcgcgccctggaagaccgcaaa
cacctgatcgaagaaaacctacgcctcaccgagcagctcagggaccgctaccgtcccgcc
aatttgatcgggacctccaaggtcatgagcgaggtctaccagcaaatccgtcaggtctcc
caaagtgaggcgacggtcatgttgctgggtgagagcggcgtcggcaaggagctggtcgcc
cacgcgatccactacgaaagcaatcgcgccaacggtccgttcatcaaggtcaactgcgcg
gctttgcccgaatcggtactcgagagcgaactgttcggccacgagcgcggtgccttcacc
ggcgccatcaaaacgcgcaagggccggttcgagcaagcccatggcggcaccttgtttctc
gacgaaatcggcgatttctcaccggcgatccaagtcaccctgctgcgcattctgcaggag
aaggaactggaacgggtcggcggcgaccggaccatcaaggtggacgtgcgcatcatcgcg
gccaccaaccgcgacctggaatcgctgatggagcagggcaagttccgccaggatctctac
taccggctgaacgtgttcccaatccacattccgccgctgcgcgagcgcaagaccgacatc
cctctgctgtgcgaccacttcatcgagaagtacaacaagatcaacggcaagaatatccaa
cgcctttcctcttcggcgatcgacatgctgatgagctaccactggccaggcaacgtgcgt
gaattggagaactgtatggaacgcgcggtgctgctgagccagaacgacgtgattcgcacc
atcgacctgccgcccacgctgcagaccgccgatgcgacccacaccaagacggaaggcacc
ctggaaacggcactccagcgcatggaacgcgagctgatcatggatgcgttgatttccacc
cacggcaacatggccaaggccgccaagatcctgggtctcaccgagcgcaagatgggattg
cgcgtcaaacgctacaacatcaatcccaaaaacatccgcgccaagggctatcacacgaaa
atgtag
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integrated database retrieval system
