Sulfidibacter corallicola: J3U87_11515
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Entry
J3U87_11515 CDS
T07864
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scor
Sulfidibacter corallicola
Pathway
scor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J3U87_11515 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scor03019
]
J3U87_11515 (pnp)
03016 Transfer RNA biogenesis [BR:
scor03016
]
J3U87_11515 (pnp)
Enzymes [BR:
scor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J3U87_11515 (pnp)
Messenger RNA biogenesis [BR:
scor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J3U87_11515 (pnp)
Transfer RNA biogenesis [BR:
scor03016
]
Prokaryotic type
tRNA degradation factors
J3U87_11515 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
Virulence_fact
Motif
Other DBs
NCBI-ProteinID:
QTD53080
UniProt:
A0A8A4TU85
LinkDB
All DBs
Position
3919422..3921512
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AA seq
696 aa
AA seq
DB search
MKIVKESMQLGGAEFSIETGKLAKQAHGSVVVRHGDSMVLVACCGTQEWEPDRPFFPLTV
DYRESYYAAGRFPGGFYKREGRASTKETLVCRLIDRPMRPMFTEGYLGETQIAANVISSD
GVHEADVLAMVGATAAAYLSPVPFPQPLASVRVGLVDDELVVNPTAEQREKSLLDLVVAG
TKDAIAMVEAGAEFVDEAKIQEALEFGHEHIKTIIEMIERMKAQMEIVKWEVPEKEIDTD
FYNELKERFSADMMAAMTTKGKHAGDAALKEVKKQVLAAYEGDTEEAAEKVELASKYFGK
IKEEIFRNYLLVERKRTDGRAFDEVRPIWSEVGYLPSVHGSAIFTRGETQALVSLTMGSK
SDAQILDGLHTESKKNFMLHYNFPPFSVGECRPMRGPGRREIGHGMLAERALEPVLPGGE
DFPYTIRLVSEIIESNGSSSMASVCGGCLAMQDAGIPLKAPVAGVAMGLVKEGDTYAVLT
DIQGAEDHYGDMDFKVTGTKDGITALQMDIKVKGLTKEIMAEALAQAKKGRLEILEKMAE
TLQAPRDHYPEHAPQIVTLQIPIDKIRDVIGVGGKVIRGIIEKTGVKIDIEDDGKCVIFS
PNAAGLNAARKMVEELIAVPEEGKTYRGKVKRIVDFGAFVEILPNTEGLLHISEIANYRV
RAVTDEIQEGEEVMVKVISLENNGRIRLSRKALLEG
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattgtgaaagaatccatgcagctaggcggcgccgagttcagtatcgaaacgggc
aagctggccaaacaggcccacggctccgttgtcgtccgccacggtgacagcatggtctta
gttgcctgctgcggtacacaggaatgggaaccggaccggcctttctttcccctgaccgtc
gactaccgcgaaagttactacgccgcgggccgttttcccggcggcttctacaagcgcgag
ggacgcgccagcaccaaggaaacgctggtctgccgtttgatcgaccgccccatgcgcccc
atgtttaccgaaggttacctcggtgagacgcagatcgccgccaacgtgatttcttccgac
ggcgtgcacgaggccgatgtcctcgccatggtcggcgccaccgccgcagcctacctctct
ccggtcccctttccgcaaccgctggcttcggttcgcgtcggtctcgtcgacgacgaactg
gtcgtcaaccccaccgccgaacaacgcgagaagagcctgctcgacctggtcgtggccggt
accaaagatgcgatcgccatggtcgaagccggcgctgaattcgtggacgaagcgaagata
caggaagcgctggagttcggtcacgagcacatcaagaccatcatcgagatgatcgagcgc
atgaaagctcagatggaaatcgtgaagtgggaagtgcccgagaaggaaatcgacaccgac
ttctacaacgaattgaaggaacgcttcagcgccgacatgatggcggcgatgaccaccaaa
ggcaaacacgccggcgacgcggccttgaaggaagtcaagaagcaggttctcgcagcctat
gagggcgacaccgaggaagctgccgaaaaggtggaactggcttccaagtacttcggcaag
atcaaggaagagatattccgcaactacctgctggtcgagcgcaagcgcaccgacggacgc
gccttcgacgaagttcgccccatctggagcgaagtgggctatctccccagcgtgcacggc
agcgcgattttcacgcgtggcgaaacccaggcactggtttcgctgaccatgggctccaag
agtgacgcccagattctggacggcctgcacaccgaatccaaaaagaatttcatgttgcac
tacaacttcccgcccttcagcgtcggcgagtgtcgcccgatgcgcggccccggccgtcgc
gaaatcggccacggcatgctggccgagcgcgcgctggaaccggttctgcccggcggtgag
gacttcccctacaccatccgtctggtttcggaaatcatcgagtccaacggttcgagctcg
atggcttcggtttgcggtggctgcttggccatgcaggatgccggcatccccctcaaggca
ccggtcgccggcgtggcgatgggcctcgtcaaggaaggcgatacctacgccgtcctgacc
gacatccaaggcgccgaagaccactacggtgacatggacttcaaggtgaccggcaccaaa
gacggcatcaccgcactgcagatggacatcaaggtcaagggtctcaccaaggagatcatg
gccgaagcgttggcccaggccaaaaagggtcgcctcgagatcctcgaaaagatggccgaa
accctgcaagcgccgcgtgaccactatcccgaacacgcaccgcagatcgtcaccctgcag
attccgatcgacaagattcgcgacgtcatcggtgtcggcggcaaggtgatccgcggcatc
atcgaaaaaaccggcgtcaagatcgacatcgaagacgacggcaaatgcgtgatcttctcg
cccaacgccgccggcctcaacgccgcgcgcaaaatggtggaagaactgatcgccgttccc
gaggaaggcaagacctaccgcggcaaggtgaaacgcatcgtcgatttcggcgccttcgtc
gaaatcctgcccaacaccgaaggcctgctccacatttccgaaatcgccaactaccgcgtg
cgcgcggtgaccgacgagatccaggaaggtgaagaggtcatggtgaaggtcatctcgctg
gagaacaacggccgcattcgcctgagccgcaaggcattgctcgaaggctga
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