Sulfidibacter corallicola: J3U87_11875
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Entry
J3U87_11875 CDS
T07864
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
scor
Sulfidibacter corallicola
Pathway
scor00900
Terpenoid backbone biosynthesis
scor01100
Metabolic pathways
scor01110
Biosynthesis of secondary metabolites
Module
scor_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
J3U87_11875
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scor01006
]
J3U87_11875
Enzymes [BR:
scor01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
J3U87_11875
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
J3U87_11875
2.5.1.29 geranylgeranyl diphosphate synthase
J3U87_11875
Prenyltransferases [BR:
scor01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
J3U87_11875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-ProteinID:
QTD53150
UniProt:
A0A8A4TUF4
LinkDB
All DBs
Position
complement(4020289..4021176)
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AA seq
295 aa
AA seq
DB search
MIDNEQLQHWIDRVDTELVRYFANKDMTCNPLDRAMEYTLLAGGKRLRPLLSMVVCAAYD
KDPEAAIPFALASEFLHTYSLIHDDLPCMDDDDMRRGKPTNHVVFGEANAILAGDALHCE
AFQLLVSSTYPGFTAETRQTVILELCEAVGRRGMVAGQVMDLAQEGQDYDLERLKLMHRR
KTGALLRFCVRLGGHLAGVREPELAALTRYAEALGLMFQVVDDLLDEESSSDTLGKTAGK
DAGQDKATFPKLLGSEKAHAFADGLLEEALAALKDLEVDAELLAEIAQYVRHRDY
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgataatgaacagttacagcattggattgaccgcgtcgacaccgaactggtgcgt
tacttcgcgaacaaggacatgacctgcaatccgttggatcgcgccatggaatacacgttg
ttggcgggtggcaagcgtttgcggccactgctgtccatggtggtgtgcgccgcatacgac
aaggatccggaggcggcgattccctttgcactggcctcggagttcctgcacacctacagc
ctgatccacgacgacctgccctgtatggacgacgacgacatgcggcgcggcaagccgacc
aaccacgtcgtcttcggcgaggccaacgcgattctcgccggcgacgccctgcattgcgag
gcctttcagctactggtttcttcgacgtatcccggctttacggcggaaacgcgccaaacc
gtcattctcgagttgtgcgaggcggtggggcggcgcggcatggtggccggtcaggtgatg
gacctcgcccaagagggccaggactacgatctggagcgcctgaaactgatgcaccgccgc
aagacgggtgcgttactgcggttttgcgtgcgattgggtggtcatctcgcgggggtccgt
gaacccgagctggcggcgctgacccgctatgccgaggcccttggcctgatgttccaggtc
gtggacgatttgctggacgaggagtccagcagcgacacgctgggcaagacggccggcaag
gacgccggccaggacaaggcgaccttccccaagctgttgggcagcgaaaaggctcacgcg
tttgccgacggtctgttggaagaagccctggccgccttgaaggatctcgaggtggacgcc
gagctgctggccgaaatcgcccagtacgtccgtcaccgagattattga
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