Sulfidibacter corallicola: J3U87_11880
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Entry
J3U87_11880 CDS
T07864
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
scor
Sulfidibacter corallicola
Pathway
scor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J3U87_11880 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scor03400
]
J3U87_11880 (xseB)
Enzymes [BR:
scor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
J3U87_11880 (xseB)
DNA repair and recombination proteins [BR:
scor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
J3U87_11880 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
DHQS
YihI
QueC
TPR_11
Motif
Other DBs
NCBI-ProteinID:
QTD53151
UniProt:
A0A8A4TVI3
LinkDB
All DBs
Position
complement(4021283..4021558)
Genome browser
AA seq
91 aa
AA seq
DB search
MTTKKAAKTAKSAEQELSFEAQLAQLEEIVQKLDAVDVPLEEAIACYEQGVKLSLKLHKT
LDQAQRKIEILTQAGPEGIETESFDEGDCQA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaaaaaagccgcaaaaaccgccaaatccgcggagcaggagctttccttcgaa
gcccaattggcgcaattggaagagatcgtccaaaaattggatgcggtggacgtaccgctg
gaagaagcgattgcctgttacgagcaaggtgtgaaattgagcctcaagcttcacaagacc
ctggatcaggcccaacgcaaaatcgaaattctgactcaggcggggcccgagggaatcgag
accgagtccttcgacgaaggcgactgccaagcctga
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