KEGG   Sulfidibacter corallicola: J3U87_12435
Entry
J3U87_12435       CDS       T07864                                 
Symbol
alr
Name
(GenBank) alanine racemase
  KO
K01798  Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
Organism
scor  Sulfidibacter corallicola
Pathway
scor00300  Lysine biosynthesis
scor00470  D-Amino acid metabolism
scor00550  Peptidoglycan biosynthesis
scor01100  Metabolic pathways
scor01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:scor00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    J3U87_12435 (alr)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    J3U87_12435 (alr)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    J3U87_12435 (alr)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    J3U87_12435 (alr)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:scor01011]
    J3U87_12435 (alr)
Enzymes [BR:scor01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.1  alanine racemase
     J3U87_12435 (alr)
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     J3U87_12435 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:scor01011]
 Precursor biosynthesis
  Amino acid ligase
   J3U87_12435 (alr)
  Racemase
   J3U87_12435 (alr)
SSDB
Motif
Pfam: Ala_racemase_N Ala_racemase_C Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: QTD53254
UniProt: A0A8A4TVU5
LinkDB
Position
complement(4169793..4172300)
AA seq 835 aa
MLDLTLQQTTALLDGHLSGGCGDQPIEQVETDTRLPFRHHSLFVALSGPNYRGETFLPEA
ARRGAVAAVVDRNRIASVEEAPLPTIAVESPLRALQKLAQHHKALLGLDAVAITGSNGKT
ILKDFLAGLLTKRFLVQASPGSFNSQVGVALSLLGLRPGADLALIEAGISAVGEMQHLET
MIAPRYGILTNIGLAHFEGFGSRTKIASEKLELFRHLPENGWLLLPEEPLLTPELLSHIR
CPIHRFGENPELPRLVDAVSLGEGRSGLSIRFPDGSYHELRLAIDVSWREVFNTMLAGVC
AAWLFGMTPVEIARAATHFGPPLNRLEMWKSSSGAILANDTYSADPISTRSCLELFDTYP
GKRKVFVFGGMKELGERSSYEHRIVGEELARKGVDVLLMLSDLGRETAKAFEKSRPGGRV
FRFDDTRELLDFTESFAEENDLILVKGPREARLEQIVARFKGKLTQTVYYINLSKIRDNA
LTFRNLLPPNGKLLVMLKAFAYGTDATYIARFLQNHVDFFGVAYTKEALALRRGGVSNDI
LVQLVMIDDVEEVVRLSLQPVLFDLDVARALEKAAARLNKKVKVHLKVDTGMGRFGVFPH
EIGALAAAILEMPHLRIEGIMTHFSSADDPAADDFSHRQLALFHRALDELGALGIDPPLK
HAAATAASARFPEARFNMTRIGLGIYGIYPSNSVAADIDLACPIALVSKIGSLKTYPPGY
PISYNQRFTTERDSRIAFLPIGYHDGLSRAFSNQGYVMIRGRKAPIVGSICMDFTAIDVT
DLPEIEVGEPVLIFGDWRGQHIRVEDLAELEGTIPYEVLCRLSDRIQRIYLVNEE
NT seq 2508 nt   +upstreamnt  +downstreamnt
atgctcgatctgacgctgcagcaaaccacggcgttgctggacggccacctttccggtggt
tgcggtgatcaaccgatcgagcaggtggagaccgatacgcgcctcccatttcggcaccac
tccctgttcgtggctttgagtggtcccaattatcgcggtgaaaccttcttgccggaagcg
gccaggcggggtgccgtcgccgcggtggtggatcgaaaccgcattgcctcggtcgaagag
gcgccacttcccacgattgccgtggaaagccccctacgggcattgcaaaagctcgcccaa
caccacaaagccctgctgggattggatgcggtcgcgatcaccggtagcaatgggaaaacg
attctcaaggattttctcgcgggtctgttaaccaagcgttttctggtacaggccagcccc
ggaagtttcaacagtcaggtcggtgtggctctgtcgttgttgggattgaggcctggggcc
gatcttgccttgatcgaggccggcatttccgcggtcggcgagatgcagcacctcgagacg
atgatcgccccgcgctacggcattctgaccaatatcgggctggcccatttcgaaggattc
ggttcgcgtaccaagatcgcctcggagaaactcgaactctttcgccatcttcccgaaaac
ggttggttgctcctgcccgaggagccgttgctgactccggaactgctgagccacattcgg
tgcccgatccaccgtttcggcgagaaccccgaattgccgcgcctggtggacgccgtttct
ctgggagagggtcgaagcggtctgtcgatccggtttccggacggcagctatcacgaattg
cgcctggcgatcgacgtatcctggcgcgaggtcttcaataccatgctggcgggcgtatgc
gccgcctggctattcggcatgacgcccgttgagatcgcccgtgcagccacccacttcggc
ccaccgctcaatcgtttggaaatgtggaaatcctcttcgggcgccattctcgccaacgac
acctacagcgccgacccgatttcgacccgctcctgtctggaactgttcgatacctatccc
gggaagcgcaaggtgttcgtcttcggtggcatgaaggaactgggcgagcgatcgtcctac
gagcaccgcatcgtgggagaagaactggcccgcaagggtgtcgatgtcctgttgatgttg
agcgatttgggccgggagacggcgaaggctttcgaaaaaagccgacctggtggacgagtc
tttcggttcgatgacacgcgggaactgctcgatttcaccgaatctttcgccgaagaaaac
gatttgatcttggtgaaaggtcctcgcgaagcccggttggagcagatcgtcgcccgcttc
aagggcaagctgacgcaaaccgtgtactacatcaacctgtcgaaaattcgcgacaacgcc
ctgacctttcgcaacctgttgccaccgaacggcaaactgttggtcatgctgaaagccttc
gcctacggcaccgatgccacctatatcgcccgcttccttcaaaatcacgtggactttttc
ggggtggcctacaccaaggaggcgctggcgttgcggcggggcggcgtcagcaacgacatc
ctggttcaattggtgatgatcgacgacgtggaggaggtcgtcaggctttcgctgcaaccg
gttctgttcgatctcgacgtggcgcgggcgttggaaaaagcggcggcccgcctgaacaag
aaggtcaaggtccacctgaaagtggataccggcatgggacgattcggcgtgtttccccac
gaaatcggagcattggccgccgcgattctggaaatgccccacctgcggatcgaaggcatc
atgactcacttttcctccgccgacgatcccgccgccgacgatttctcgcatcgccaattg
gccctgttccatcgggcgttggacgagttgggcgccctgggtatcgatccgcccctgaag
cacgccgccgcaacggccgcgagtgcccgcttccccgaggcgcgtttcaacatgacccgc
atcggactgggaatctacgggatctatccgtccaattccgtcgctgccgatatcgacctc
gcctgtcccatcgccctggtaagcaagatcggaagtctgaaaacctacccgcccggctat
cccatcagctacaaccagcgtttcacgaccgaacgcgacagccgcatcgccttcctgccc
atcggctatcacgacgggctgtcgcgggctttttcgaaccagggctacgtcatgattcgg
ggtcgtaaagcgccgatcgtcggttcgatctgcatggatttcaccgccatcgacgtgacc
gaccttcccgaaatcgaagtgggcgaaccagtgctgatcttcggtgattggcgcggccag
cacattcgggtcgaggacctggccgaactcgagggcaccattccctacgaggttttatgc
cgtctcagcgaccggatccaaagaatttatctggtcaacgaggagtga

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