Sulfidibacter corallicola: J3U87_13135
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Entry
J3U87_13135 CDS
T07864
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
scor
Sulfidibacter corallicola
Pathway
scor03030
DNA replication
scor03430
Mismatch repair
scor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J3U87_13135 (holB)
03430 Mismatch repair
J3U87_13135 (holB)
03440 Homologous recombination
J3U87_13135 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scor03032
]
J3U87_13135 (holB)
03400 DNA repair and recombination proteins [BR:
scor03400
]
J3U87_13135 (holB)
Enzymes [BR:
scor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J3U87_13135 (holB)
DNA replication proteins [BR:
scor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J3U87_13135 (holB)
DNA repair and recombination proteins [BR:
scor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J3U87_13135 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Motif
Other DBs
NCBI-ProteinID:
QTD53392
UniProt:
A0A8A4TWP6
LinkDB
All DBs
Position
4359295..4360293
Genome browser
AA seq
332 aa
AA seq
DB search
MFEKVYGHDRIKSMLAKMVTRDQLHHGLCFHGPAGIGKGLLAFEVSRAMMCDTRDGCGTC
RHCVKMASGNHPDFKWVEPEGADIKVDQIREIAENLHYRPFEGPVRMIVMDGMERMRDEA
ANAFLKSLEEPPPYVYFILVTADLKALLPTIQSRCQKVAFQSLTHTDKVHILKDRFDKDE
QQAQNLAGISFRRLETEDEAWQIFREDIQLALKYLQLMRGNGHAIDLLGDLVRDKEGFAR
FKDHLTALVRELSWLARGIAPQPFFQEFEGAMRELTAKAKPADWRDLYEQLLWLEGQRRR
NLNQGLWFNALSVSGLGLQEESEAQLRQRLRR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaagtgtacggccacgatcgcatcaagtcgatgttggcgaaaatggtcacc
agggaccagctccaccacggcctctgcttccacgggcccgccggaatcggcaagggattg
ctggctttcgaggtttcgcgggccatgatgtgcgatacccgggacggttgcggtacctgc
cggcactgcgtcaagatggcgtccggcaaccacccggatttcaaatgggtcgagcccgag
ggtgcggacatcaaggtcgaccagattcgcgaaatcgccgaaaacctccactatcgcccg
ttcgagggaccggtgcgcatgatcgtcatggatggcatggaacgcatgcgtgacgaagcg
gccaacgcctttctgaagtcactggaagaaccgcccccctacgtctatttcattctggtc
acggccgatctcaaggcgttgctgccgacgatccaatctcgttgccagaaagtggctttc
caaagcctgacacatacggacaaggtccacatactgaaggaccgcttcgacaaggacgaa
caacaggcccagaacctggccggcatcagtttccgccggttggagaccgaggacgaggcc
tggcagatctttcgcgaagacatccaactcgcgctcaaatacctgcagcttatgcgcggc
aacggccacgcgatcgatttgttgggtgacctggttcgcgacaaggaagggttcgcacgc
ttcaaggaccacctgacggcgctggtccgcgaactgtcctggctggcgcgcggcattgca
ccccaaccgtttttccaggagttcgaaggcgccatgcgcgaactgacggccaaggccaag
ccggcggactggcgcgatctctacgagcaattgttgtggctggagggtcagcgccgacgc
aacctgaaccagggcctgtggttcaacgcgctgagcgtgagcggcctgggcctgcaggaa
gagtcggaggcccagcttcgccagcgacttcgccgctga
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