Sulfidibacter corallicola: J3U87_16125
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Entry
J3U87_16125 CDS
T07864
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
scor
Sulfidibacter corallicola
Pathway
scor00521
Streptomycin biosynthesis
scor00523
Polyketide sugar unit biosynthesis
scor00541
Biosynthesis of various nucleotide sugars
scor01100
Metabolic pathways
scor01110
Biosynthesis of secondary metabolites
scor01250
Biosynthesis of nucleotide sugars
Module
scor_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J3U87_16125 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J3U87_16125 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J3U87_16125 (rfbC)
Enzymes [BR:
scor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
J3U87_16125 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QTD53973
UniProt:
A0A8A4TWX4
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Position
complement(5345992..5346531)
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AA seq
179 aa
AA seq
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MEIEKYDIEGPLLLKPKVFRDHRGFFMEAYNKRVFEELGIISDFVQDNHSKSVKHTLRGL
HYQVNRWQAKLVRVIQGEIWDVAVDIRPNSPTYGKSVCATLTCANQHQFYIPVGFAHGFQ
VVSETAEVIYKCSDFWSPEDERGVLWSDPQLGLNWPNPDSPILSDKDLKHPEFKNLRLD
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgagaaatacgacatcgaaggtcctcttctgctcaaacccaaggttttcaga
gaccaccgcggcttcttcatggaggcctacaacaagcgggttttcgaggagctgggaatc
atcagcgatttcgttcaggataatcattcgaaatcggtgaaacacaccttgcgcggcctg
cactatcaggtcaatcgttggcaagccaaactggttcgcgtgatccagggggaaatctgg
gatgtggccgtcgacattcgccccaactcgccgacctacggcaagagcgtatgcgccacg
ctcacgtgtgccaatcagcaccagttctacattccggtcggatttgcgcacgggttccag
gttgtcagtgaaaccgccgaagtcatctacaagtgctccgatttctggtcgccggaagac
gagcgcggcgtgctttggtccgatccacagttgggactcaactggcccaatccggattca
cccattttgagtgacaaggacttgaagcaccccgaattcaagaatttgcgcttggattga
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