Sulfidibacter corallicola: J3U87_16815
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Entry
J3U87_16815 CDS
T07864
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
scor
Sulfidibacter corallicola
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scor03009
]
J3U87_16815
Enzymes [BR:
scor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
J3U87_16815
Ribosome biogenesis [BR:
scor03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
J3U87_16815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QTD54109
UniProt:
A0A8A4TVY8
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All DBs
Position
5548721..5550001
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AA seq
426 aa
AA seq
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MEERLQKIIARAGITSRRDAERLITEGSVSVNGNIITELGAKADLSKDHIKVNGKLLQPE
TGENVYILLNKPRGVVSTVHDPEGRTVVTDLVKGQKVRLYPVGRLDVNTEGALLLTNDGD
LTHQLLAPRSKCPKTYVVKVSGSPSTKVLERLQRGITVEGTRFSSCELEVLKPGNNTWVK
VVLHEGKNLQIRKMFEAVGHPVSKLKRIAFAFLTTQGLSHGEWRELSEVEISRLKRGQFN
SLIPINPFRFLREYGVTVQKPRGRARTAKWTESRGKPGERGRPTGTREGKAQDGQAKRPE
KTAKETAERSSEGSPKSSNRKKLTDRSTWRKGQGGSGPGGKLRGSGNSRGRSGRPGTGAR
EESGYKSRDRARKPEGEGSAKGKTGAKPQRFSSDRPKGAPSKNARYQGFRKGRGKFGGSG
GRGRGR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
ttggaagagcgccttcagaaaattatcgcccgcgcggggatcacttcgcggcgggatgcc
gaacgcttgatcacggagggaagtgtcagcgtcaacggcaacatcatcaccgagctgggt
gccaaggccgatttgtcgaaggaccacatcaaggtcaacggcaagctgctccagccggaa
accggcgaaaatgtctatattctcttgaacaaaccgcgtggggtggtttccacggttcac
gatcccgagggccgcaccgtcgtgacggacctggtcaagggccagaaggttcgcctatac
ccggtgggccgcctcgacgtcaacaccgaaggtgccctgttgctgaccaacgacggcgac
ttgacccatcaactgctggcccctcgctcgaaatgtcccaagacctacgtggtcaaggtg
agcggatcgccctcgaccaaggtgctggaacgcctgcagcgcggcatcacggtggagggg
acccgtttcagttcttgcgagttggaagtgctcaaacccggtaacaacacttgggtcaag
gtcgtgctccacgaaggcaagaacctgcaaatccgcaagatgttcgaagcggtcggccat
ccggtttccaagctcaagcgcatcgccttcgcctttctcaccacccaggggctgtcgcac
ggcgagtggcgcgagttgagcgaggtcgagatttcgcggctcaaacggggccagttcaat
tcgctgattccgatcaatccgtttcgtttcctgcgcgagtacggggtgaccgtccagaaa
ccgcgcgggcgtgcccgcacggccaagtggaccgagagccgcggtaagccgggcgagcgc
gggcgcccgaccggcacgcgggagggcaaggcgcaggatggtcaggccaaacgcccggaa
aaaaccgcgaaggagaccgcggaacgatcctcggaaggctcacccaagtccagcaaccgg
aagaagttgactgatcgaagcacttggcgcaaaggccagggcggatccggaccgggtggg
aaattgcgcggttccggcaattcgcgtgggcgaagtggtcgccccggtacgggcgctcgc
gaggaatccggctacaagagtcgcgatcgggccaggaaacccgagggtgaagggagcgcc
aagggcaaaaccggcgccaagccgcagcgtttttccagcgatcgccccaagggagcgccc
tccaagaatgcccgttaccaggggttccgcaagggacgcggcaagttcggcgggtccggt
ggtcgaggccgcggccgctga
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