Sulfidibacter corallicola: J3U87_18340
Help
Entry
J3U87_18340 CDS
T07864
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
scor
Sulfidibacter corallicola
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scor01002
]
J3U87_18340
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
scor02042
]
J3U87_18340
Enzymes [BR:
scor01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
J3U87_18340
Peptidases and inhibitors [BR:
scor01002
]
Metallo peptidases
Family M9
J3U87_18340
Bacterial toxins [BR:
scor02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
J3U87_18340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
fn3
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
InlJ_IG
Motif
Other DBs
NCBI-ProteinID:
QTD47555
UniProt:
A0A8A4TLS2
LinkDB
All DBs
Position
complement(5976224..5979835)
Genome browser
AA seq
1203 aa
AA seq
DB search
MTRFLASISICVLMALTALPAFSASSRPTDLAPRGRVQHRPAFCAERVSLPHHKTHPPRP
AWTSRETQDRIPLHHTPLRAKASSPCSAYEWGNLSGQAFADAVADADQSCLDVLWTFNAE
TARALSNDRLEAVAQLTQNEAHRLPENAVRIERLMYFQQIALFHEWYEDDLTYPSDLFPV
LQTATDRVAAQGAFRNETSAMSALRMQWSVSIDSNGGSHRVIDTVYWMLTRFRDNPDLAK
EYRERQAAFNLFSTLARQPGIYNGTHGENSPWYRLLDDRFLNLVQDYALQTQYDENTEAI
VNNSLYALGNFSVLEPKTSQRAHAILSQAYYNQEVHSGPWFNALNYLSWYYEATLSDGTQ
LDLDAIKAEVHALALPNTFVFDEGRVTFKTAISYAKAAQLYDAMQEVEAQFFRKTTFLEE
TPGDTNENATLVIYASPDDYQKFQPFLYGTDTNNGGIYIENWATLFTYDRTPDQSYLTLE
ELLRHEYVHYLDGRYVVVPSFGEGEIYQGDRLTWYAEGLAEFLAGSTREHEVLPRRIYAE
HIAGDSRRMTVAEIVRATYSSGFDFYRYSGYLFTYLDAEQPDLLAELLDGVRSNQAAKVD
AIYLRMANDASLQQGYTQYLDTQIAALQDGSGLFAEDVPTARTPDSLPADNAGDIESILG
STVQAQMTQFRTWKGRYQASFTLTKNIQQSEGATRDQFEQSMDDALAALNPLGNNFISAV
SWFGSLNRSGNHVTATCVIEGPFSTEGSTDNTPPSAPTGLRASGEIGAIALSWNANTEPD
LSGYTLHRSEHAEGPFSAIAELNADATTATDTAVTPGQTYYYQVIAQDFAGNESNPSNST
SASARDDGGDGSDGGDGGDGSDGGDGGDGSDGGDGGDGSDGGDGGGLPATPVNVTATSGS
TGIQVTWRTGDDPNQSDPTLAGFVIYRSTPSVGWTRINQEPISSTHYLDGDLIPGEWYYY
SIRAISQSGSLSNYSDIAYAQAQEGHGDSQRILLVNDSTYGNDSYLQSFATILDSNEIEY
EVWEIRSQGPVTDLSPYLGGMVIWSLGYYHPDQGNHFDASQRDMIRNYLSRGGNLVLSGA
YASLYLDDTPLFRDYLHATHVAHGGRVPGIVPIDGGILDTPYWLSLDNVWYQSEVDIQPP
AKACYAYDGYYGQNRSSGTAIFTVEDGFRVVYFTMPFGHLSELAREELLLQSVNWMIPGL
LAE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgactcgctttttggccagcatttctatctgcgttttgatggcactcaccgcccttccg
gcattttccgcctccagtcgtcccaccgacctcgcccctcgcggccgcgttcaacatcgt
ccggcgttttgcgccgaacgcgtctcgctgcctcaccacaaaacccatccaccccgcccc
gcgtggacctccagggagactcaggaccggatccccctgcaccacacgcccctgcgcgcc
aaagcttccagtccctgttccgcgtacgagtggggcaacctatccggtcaagccttcgcc
gatgccgtggcggacgccgatcaatcgtgcctcgacgtgctgtggaccttcaacgccgaa
acggcccgtgcactatcgaacgatcgcttggaggccgtcgcccaactgacccaaaacgaa
gcccatcggcttcccgagaatgcggttcgcatcgagcggctgatgtatttccagcaaatc
gccctgttccacgaatggtacgaggacgatctcacctatccgtccgacctgtttcccgtg
ctgcagacggccactgaccgtgttgccgcgcaaggtgcgttcagaaacgaaacttcggcc
atgtccgcgttgcggatgcaatggtccgtttccatcgacagcaacggcggcagtcaccgc
gtaatcgatacggtgtactggatgttgacccggtttcgcgacaaccccgatctcgccaag
gagtacagagaacgccaagcggccttcaatctcttttcgacgctggctcggcaacccggc
atctacaacggaacccacggcgaaaacagcccctggtaccgccttctggacgaccgtttt
ctgaatctcgtgcaggactatgccctacagacacaatacgacgagaataccgaggccatc
gtcaacaactccctttacgcgctgggtaacttcagcgtgctggaacccaaaacctcgcaa
cgcgctcacgccattctcagtcaggcctattacaaccaggaagtccattccggtccctgg
ttcaacgccctgaactacttgtcctggtattacgaagccactctttccgacggcacccaa
ctcgatttggacgcgatcaaggccgaggtccacgctctggcgctcccaaataccttcgta
ttcgacgaaggacgcgtcacgttcaagaccgcgatctcctacgccaaggcggcgcaactc
tacgacgccatgcaggaagtggaagcgcaattcttccgcaagaccaccttcctggaggaa
acccccggcgacaccaacgagaacgccacccttgtcatctacgcctcccccgacgactac
caaaagttccagccgttcctttacggcacggacaccaacaacggcggtatctacatcgag
aattgggcaacccttttcacctacgatcgcacgcccgatcaatcctatctgactctggaa
gaattgctccgccacgagtacgtccactatctggacggtcgctacgtcgtggttcccagc
ttcggtgaaggggaaatctatcagggcgatcgcctgacctggtacgcggaggggctggct
gaattcctggccggcagcacccgcgaacacgaggtgctcccccgtcgcatctatgcggag
cacattgccggagacagccggcgcatgaccgtggccgagatcgtgcgggccacctacagt
tccggtttcgacttctatcggtattcgggttacctgttcacctacctggatgccgagcaa
ccggacctcctggccgaactgctcgacggagttcgcagcaaccaggccgccaaggtcgat
gcgatatatctgcgcatggccaacgacgcctcgttgcaacagggatacacccaatacctc
gatacacagatcgcggcgctccaggacgggagcggcctgttcgccgaggacgtccctacg
gcacgcacgcccgacagtctcccggccgacaacgccggcgacatcgaatccattctcggc
agcaccgtgcaagctcagatgacccaattccggacgtggaaaggtcgttatcaagcttcc
ttcaccctgaccaagaacatccaacaatcggaaggggcgactcgggatcaattcgaacag
agcatggacgatgccttggcggcgctgaatcccttgggcaacaacttcatctccgccgta
tcctggttcggcagcctgaatcgcagcggaaaccacgtgacagccacctgcgtcatcgaa
ggcccgttcagcaccgaaggctcgaccgacaatacaccgccctcggctcccaccggctta
cgcgcctcgggtgaaatcggcgccatcgcgctgagctggaacgcgaataccgagcccgac
ctctcggggtacaccctacatcggtccgaacatgccgaaggccctttctcggccatcgcc
gaattaaacgccgatgcgaccaccgcaaccgacacagcggtcactcctggccaaacctac
tactaccaggtgattgcgcaggacttcgccggcaatgaatccaatccctccaacagcaca
tcggcaagtgctagagacgacggcggtgacggctccgacggtggtgatggtggcgatggt
tccgacggtggtgatggcggtgacggctccgacggtggtgatggtggcgatggttccgac
ggcggcgacggtggtggcctaccggctacgcccgtcaacgtcacagccacttcgggatcg
acaggcattcaggtcacctggcgaaccggcgacgaccccaatcagagcgatcccaccctc
gcaggattcgtcatctatcgctccaccccctcggtcggctggacgcgcatcaatcaggag
cccatcagctcgacccactatttggatggtgatctgattccaggtgagtggtattactac
tcgattcgcgccatcagccaatccggctctttgtccaactattcggatatcgcctatgcc
caggctcaggaaggccatggcgacagtcaacggatcttgttagtcaacgactccacctac
ggcaacgacagctatctccaaagtttcgcgacaattctcgacagcaacgaaatcgaatac
gaggtctgggagatccgctcccaaggtcccgtcaccgacctgagcccctatctcggcggg
atggtcatctggtctttgggctactaccaccccgatcagggcaaccacttcgatgcatcc
cagcgcgacatgatccgaaactacttgagccggggcggaaacttggttctttcgggtgcc
tatgcatcgctctacctcgacgacacacctctgttccgggattacctccacgccacgcat
gtcgcgcatggcgggcgcgtgccgggaatcgtgccgatcgacggcggcatcctcgacacg
ccctattggctgtcgctcgacaatgtttggtaccaaagcgaggtggatatccagccgccc
gcaaaagcctgttacgcgtacgacggctattacgggcaaaatcgttcgagcggtaccgcg
atcttcaccgtcgaagacgggttccgcgtggtctacttcaccatgccgttcggtcatctg
tctgaactcgcgcgtgaggaactcctgcttcagtcggtgaactggatgatcccaggcctg
ctggccgaataa
DBGET
integrated database retrieval system
