Sulfidibacter corallicola: J3U87_18700
Help
Entry
J3U87_18700 CDS
T07864
Name
(GenBank) PAS domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
scor
Sulfidibacter corallicola
Pathway
scor02020
Two-component system
scor02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J3U87_18700
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
J3U87_18700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scor02035
]
J3U87_18700
Bacterial motility proteins [BR:
scor02035
]
Flagellar system
Chemotaxis proteins
MCPs
J3U87_18700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_4
PAS
PAS_8
HAMP_2
PAS_9
PAS_10
DAHL
CorA
Motif
Other DBs
NCBI-ProteinID:
QTD47626
UniProt:
A0A8A4TCG9
LinkDB
All DBs
Position
complement(6067632..6071168)
Genome browser
AA seq
1178 aa
AA seq
DB search
MNQGSATVDFAVLFAELPIATFAVDAAAKVVAWNQACTTLTGKAPETVVGKKAWTAFYSK
RKSTPVDQALRDAETVEEVLEWGSTTNPRSATMRVVPTLDEEGEPQGAVVTLASAEQSSE
TSLEATRMRSSVTGSGTAMMMVDRDLVITYINPATDKMLRKHLPVFQAAYPGFSLENMVG
TCIDRFHEDPSHQRKILNDPSNLPYITDIRVAHLIFNLQVTAMVDDQGEYIGNTLEWYDV
TEVRAREDQVSRLYSSVTGSGTAMMMVDRDLVITYINPATDKMLRKHLPVFQSAYSGFTM
EGLVGSCIDRFHKNPSHQRQILNDPSNLPYTTDIQVAHLIFNLQVTAMIDDKGEYFGNTL
EWYDVTEVRAKEDQVSRLYSSVTGSGTAMMMVDRDLVITYINPATDKMLRKNLPIFQSVF
PGFSLENLIGTCIDRFHKDPEHQRRILANPDNLPYTADIQVKNLIFNLQVTAMMDEKGEY
IGNALEWYDVTETRAREDEISRLTSAVEGSGTAVMTVDRDLIIRTINPASLRLLRKHQSH
FQSAFPGFDPDNMIGTCVDKFHVKPEYQRGILNNPDNLPHSADIQVGPMIFELNVSAMFD
GNGEYIGNSLEWQDVTEAREKATRVRSLESMIEGAATNLMMCDKEFRITYCNPAVTQLLT
KYQSQLRQIFASFDASRLLGTCIDIFHKNPAHQRSILGDPRNLPYKSEITVAGLEFGLNA
TALYDDSGDLIGNAVEWVDYNDRSVYRDEVNTVIESCTNGNLRRRGSTEHLSDVFRPMME
GINNIIDAIVAPISDLKEKLESVSAGDLTAFITSDYQGDHAALKDSLNQTLESLNDILSK
VRVTSEQVNTGARQVSDASQSLSQGATEQAAALEQITASMAEMASQTKQNAENATQANQL
AAHSRKSAESGNSQMKEMLESMKEIDESSKNISKIIKVIDEIAFQTNLLALNAAVEAARA
GVHGKGFAVVAEEVRNLAARSANAAKETTALIEESIKKVNQGTSIAGQTATGLTEIVEGI
TKVTDLVAEIAAASNEQAQGIAQVNKALGQLEQVTQQNTANAEQSAAASQQLSSQAVQLN
ELLTKFKLKKKEVPEIGGNLSPEMMQAFKQFMAQQMGVSTAAGIAPGPAASPAPVSTGYG
SPVNSQNVNYGSSPAPHKGSSLDPNKIISLDDSEFGKY
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaggctccgcgactgtagattttgcagttttgttcgccgagctacccatcgcg
acctttgccgtcgacgccgccgccaaggtcgtcgcttggaatcaggcctgcacgacgttg
accggaaaggcaccggaaaccgttgtgggtaaaaaggcttggacggctttctattccaaa
cgcaagagtacgccggtggatcaggcactgcgcgatgcggaaaccgtcgaggaagtgctc
gaatggggcagcaccaccaatccgcgtagcgcgaccatgcgcgtggtaccgaccctcgac
gaagagggcgaaccccagggagcggtcgtgacgctcgccagtgccgagcagagctcggaa
accagcctcgaggccacccgcatgcggtcttcggtcacgggctccggcaccgccatgatg
atggtcgatcgcgatctcgtcatcacctacatcaaccccgccaccgacaagatgctgcgc
aagcacctgcccgtctttcaggcggcctacccgggattttcgctggagaacatggttggc
acctgcatcgaccgtttccacgaggatcccagtcaccagcgcaagatcctcaacgacccc
agtaacctgccctacatcaccgacatccgggtggcccatctcatcttcaacctccaggtc
accgccatggtcgacgatcagggggaatacatcggcaacaccctggagtggtacgatgtc
accgaggttcgggccagggaagatcaggtctcccgactgtactcctcggtcacgggttcc
ggcaccgccatgatgatggtcgatcgcgatctcgtcatcacctacatcaaccccgccacc
gacaagatgttgcgcaagcacctgcccgtctttcagtcggcctattcgggatttacgatg
gagggactggtcggctcctgcatcgaccgtttccacaagaatcccagccaccaacgccag
atcctcaacgaccccagcaacctgccgtacaccaccgacatccaggtggcccatctcatc
ttcaatctccaagtcaccgccatgatcgacgacaagggtgaatatttcggcaacaccctg
gagtggtacgatgtcaccgaggttcgggccaaggaagatcaggtctcccgactgtactcc
tcggtcacgggttccggcaccgccatgatgatggtcgatcgcgatctcgtcatcacctac
atcaaccccgccaccgacaagatgctgcgcaagaacctgcccatcttccaatcggtcttt
ccgggattttccctcgagaacctgatcggcacctgcatcgaccgtttccacaaggacccc
gaacaccagcgccgcattctcgccaatcccgacaacctgccctataccgccgacatccag
gtcaagaacctgatcttcaaccttcaggtcaccgcgatgatggacgagaagggcgagtac
atcggcaacgcgctcgagtggtacgacgtcaccgaaacccgcgctcgggaagacgagatc
tcgcgcctgacttcggcggtcgagggctcgggtacggccgtcatgaccgtggaccgcgac
ctgatcatccgcaccatcaaccccgcctcgctccgattgctgcgcaagcatcagtcgcat
ttccaaagtgccttccccggtttcgatcccgataacatgatcggcacctgtgtcgacaaa
ttccacgtgaagccggaataccaacggggcatcctgaacaaccccgacaacctgccccac
agcgcggacatccaggtcgggccgatgatcttcgagctcaacgtctcggccatgttcgac
ggcaacggcgagtacatcggaaactcactggaatggcaggacgtgaccgaggcccgcgag
aaagccacccgggtgcgctcactggaatcgatgatcgaaggggccgccaccaatttgatg
atgtgcgacaaggaattccgcatcacctattgcaacccggcggtcacgcagttgctgacc
aaataccagtcccagcttcgccagatcttcgccagtttcgatgcatcccgcctgctgggg
acctgcatcgatattttccacaagaatccggcccaccagcgttccatactcggcgacccg
cgcaacctgccctacaagtcggaaatcacggtcgccggtctcgaattcggactgaacgcc
accgccctgtacgacgattcgggagacctcatcggcaacgccgtggagtgggtcgactac
aacgaccgcagcgtctatcgcgacgaggtcaacacggtgatcgaatcctgcacgaacggc
aacctccgccgtcggggttcgacggagcacctttcggatgtgttccgccccatgatggaa
ggcatcaacaacatcatcgacgcgatcgtggcccccatcagcgacctgaaggaaaaactg
gagagcgtttccgccggtgacctgacggccttcattaccagtgactaccagggcgaccac
gccgccctcaaggattcgctgaaccagaccctggaatcgctcaacgacattctgagcaag
gtacgggtcacctcggagcaggtcaataccggtgcccgtcaggtttcggatgccagccag
agtctctcccagggcgcgaccgagcaggccgcggcgctggaacagatcaccgcttccatg
gcggagatggcatcgcagaccaaacagaacgccgagaacgccacccaggccaaccaattg
gcggcccactcccgcaagagtgcggagagcggcaacagccagatgaaggaaatgctggaa
agcatgaaggaaatcgacgaatccagcaaaaacatctcgaagatcatcaaggtcatcgac
gagatcgccttccagaccaacttgttggccttgaacgccgcggtcgaggcggctcgtgcc
ggagttcacggcaagggcttcgcggtcgtcgccgaggaggtacgcaacctcgcggcccgc
agcgccaacgcggccaaggagaccaccgcactgatcgaagaatccatcaagaaggtcaac
cagggcacttcgatcgccggtcaaaccgcgacgggcctgaccgaaatcgtcgagggcatc
accaaggtgaccgacctggtggccgaaatcgccgcggccagcaacgagcaggcgcagggc
atcgcccaggtcaacaaagccctgggtcagttggagcaggtcacccaacagaacaccgcc
aacgccgaacagagtgcggcggccagtcagcagttgtcgagccaagccgtgcagctcaac
gaactcctgacgaaattcaaactcaagaagaaggaagtccccgaaatcggcggaaacctg
tcaccggagatgatgcaggccttcaagcagttcatggcgcagcagatgggtgtgtccacc
gcggccggtatcgctccgggtccggcagccagccccgctcccgtgagtacgggctacggc
tcgccggtgaactcgcagaacgtcaactacgggtccagtccggcgccccacaagggcagc
agcctggatcccaacaaaatcatctccttggacgattccgaattcggtaaatactga
DBGET
integrated database retrieval system