Sulfidibacter corallicola: J3U87_19530
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Entry
J3U87_19530 CDS
T07864
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
scor
Sulfidibacter corallicola
Pathway
scor00541
Biosynthesis of various nucleotide sugars
scor01100
Metabolic pathways
scor01250
Biosynthesis of nucleotide sugars
Module
scor_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J3U87_19530 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
scor01005
]
J3U87_19530 (rfaD)
Enzymes [BR:
scor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
J3U87_19530 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
scor01005
]
Core region
J3U87_19530 (rfaD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QTD47785
UniProt:
A0A8A4TMG3
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Position
6333670..6334632
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AA seq
320 aa
AA seq
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MIIVTGGSGFIGSCMVSKLNQLGRSDIIVTDVLRTTDKWKNLRHLAYHDYLDRSQLLDFL
GNAPKIDAIFHMGACSATTERDADYLMDNNYRYTLRLAQWAMANDVRFVYASSAATYGAG
EMGYADDEAEIHRLRPLNMYGYSKQLFDLKARREGWFDKIAGLKFFNVYGPNEYFKGDMV
SVVFKAFNQIRADGVVKLFKSHRPDFVDGGQQRDFVYVKDVVEVMAWLFENPKVNGLFNL
GTGEARNFRDLVSAAFRALDLEPNIEFIDMPEHLRDRYQYFTQAEMEKLREAGYDKPFHT
LEQGVTDYVQDYLNRDFAHY
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
ttgatcatcgtcaccggtggatccgggtttatcggttcctgcatggtttccaaactcaat
cagttgggacgttccgacatcatcgtcaccgatgtgttgcgtaccaccgacaagtggaag
aatctgaggcacctggcctatcacgattacctggatcgttcgcagcttctcgattttctg
ggcaacgcgccgaagatcgacgccattttccacatgggtgcctgcagcgccaccaccgag
cgcgacgccgactacctgatggacaacaactatcgctacaccctgcggctggcccagtgg
gccatggccaacgacgtgcgcttcgtctacgccagttcggccgccacctacggcgccggc
gagatggggtacgccgacgacgaagccgaaatccaccgcttgcggccgctcaacatgtac
ggttacagcaagcaactcttcgatttgaaggcccgccgcgagggctggttcgacaagatc
gccggtttgaagttcttcaacgtctacggccccaacgagtacttcaagggcgacatggtt
tcggtggtgttcaaggccttcaaccagatcagggccgacggggtcgtcaagctgttcaaa
tcgcaccgacccgatttcgtcgacggcggccagcaacgcgatttcgtctacgtcaaagac
gtggtcgaggtcatggcttggctgttcgagaaccccaaggtcaacggcttgttcaacctg
ggcaccggcgaggcgcgcaacttccgcgatttggtgagtgccgcgtttcgggcattggac
ctggaaccgaacatcgaattcatcgacatgcccgagcacctgcgtgaccgctaccagtac
ttcacccaggccgagatggagaagctgcgcgaagcgggctacgacaaaccgtttcacacc
ctggagcaaggggtcacggactacgttcaggactacctgaaccgcgatttcgcccattac
tga
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