Sulfidibacter corallicola: J3U87_20340
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Entry
J3U87_20340 CDS
T07864
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
scor
Sulfidibacter corallicola
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scor03032
]
J3U87_20340
03036 Chromosome and associated proteins [BR:
scor03036
]
J3U87_20340
03400 DNA repair and recombination proteins [BR:
scor03400
]
J3U87_20340
DNA replication proteins [BR:
scor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J3U87_20340
Chromosome and associated proteins [BR:
scor03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
J3U87_20340
DNA repair and recombination proteins [BR:
scor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
J3U87_20340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
PqqD
Motif
Other DBs
NCBI-ProteinID:
QTD47942
UniProt:
A0A8A4TFG6
LinkDB
All DBs
Position
complement(6526061..6526330)
Genome browser
AA seq
89 aa
AA seq
DB search
MIKIDIAERITERVDIPRVVALKAVDVILDEMKDSLVRGERIEIRGFGVFQKKLRKKSVG
RDIQRAKTIEIPETYTVKFKPGIEMRVLD
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgattaagatcgacattgcagaacgcattaccgaaagggtcgacatacccagagtggtt
gcccttaaagccgtggatgtcatcttggacgaaatgaaagattcactggtgcgcggagag
cgcattgaaattcgtggattcggtgtcttccaaaagaaactgcgcaaaaaaagcgtcggc
cgggatatccaacgcgcaaaaaccattgaaatcccggaaacctatacggtgaaattcaaa
cccggcatcgagatgcgggttttggattga
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