Sulfidibacter corallicola: J3U87_21395
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Entry
J3U87_21395 CDS
T07864
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
scor
Sulfidibacter corallicola
Pathway
scor02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J3U87_21395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scor03021
]
J3U87_21395
Transcription machinery [BR:
scor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J3U87_21395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
DUF2802
Ub-Mut7C
Motif
Other DBs
NCBI-ProteinID:
QTD48149
UniProt:
A0A8A4TDI2
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All DBs
Position
complement(6879938..6880795)
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AA seq
285 aa
AA seq
DB search
MSADMSEDSHLSTENLNWYLQEISKIPQLTPDQEKVLGARIQAGDQEALKIMVESNLRFV
VSICKKYRGLGLSFLDLMNEGNIGLIEAAKRFDPGKNVKFITYAVWWIRQAIIHALAKHS
GAFRLPQKQANLMYQLGKKYNQLTQKLERTPTVEELAEALEITVAEVEQLLQVSGDNISL
SESLDDSSDFQLLDKLSQDTELSADEHLLQEAFEHQVREILKDLDQKEALVIRLRFGLEG
KEPMTLKEIGQMLSLSRERIRQIEAVALKKLRKNSAIQELRGYLT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggatatgtcggaggattctcacttatcgacggagaatctgaactggtacctt
caggaaatttcgaaaatcccgcaattgactccggatcaggagaaggtgttgggtgcgcgg
atccaggccggcgaccaggaagctctcaagatcatggtcgagtccaacctccgtttcgtc
gtcagcatctgtaaaaagtaccgtggtttgggactttccttcctggatctcatgaacgag
ggcaacatcggcctgatcgaggccgccaagcgtttcgaccccggcaagaacgtcaagttc
atcacctacgcggtttggtggatccgccaggcgatcatccacgcgctcgccaagcacagc
ggcgccttccgcctgccccagaagcaagccaacctgatgtaccagctcggcaagaagtac
aaccagctcacccagaagctggagcgcacccccaccgtcgaggagttggccgaagccctc
gaaatcacggtcgccgaggtggagcaactgctccaggtgagtggcgacaacatttcgctg
agcgagagtctcgacgacagcagcgatttccaactgttggacaagctcagccaagacacg
gagctctcggcggacgagcacctgctccaggaagcgttcgagcaccaggtccgcgaaatc
ctcaaggacctggaccagaaggaagccctggtcatccggctgcgattcgggctggagggc
aaggagccgatgacgctgaaggaaatcggccagatgttgagcctgtcgcgcgagcgcatt
cgccagatcgaggcggtagcgttgaaaaagctccgcaagaattcggcgattcaggaactg
cgcggctacctgacctga
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