Sulfidibacter corallicola: J3U87_24870
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Entry
J3U87_24870 CDS
T07864
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
scor
Sulfidibacter corallicola
Pathway
scor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J3U87_24870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scor03000
]
J3U87_24870
03400 DNA repair and recombination proteins [BR:
scor03400
]
J3U87_24870
Enzymes [BR:
scor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
J3U87_24870
Transcription factors [BR:
scor03000
]
Prokaryotic type
Helix-turn-helix
AraC family
J3U87_24870
DNA repair and recombination proteins [BR:
scor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J3U87_24870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
DUF6233
Motif
Other DBs
NCBI-ProteinID:
QTD48828
UniProt:
A0A8A4TJ48
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Position
8126646..8128010
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AA seq
454 aa
AA seq
DB search
MLSAETCRKARKSRDPRFDGKFFIAVKTTGIYCRSICPVMSPKEENVRYYPSAVEAAQAG
FRPCLRCRPDSAPGSPVWNGVNTTLERAIRMIHSGSLQDQPVPAVAARLGVSDRYLRRLF
QKHLGVSPKTFALYHQCLFAKQLLHQTHLPIHQIALASGFNSVRRFNDCFQNQLALTPTQ
VRRSGAVRSQELRLHLSYRPPYDWTHMRNFLQARAIPEMEWLDERSYGRTFSWSGCHGHF
TAEWARAEHKFLVTIECDDLSHFKPIVLNIRRLLDLDVDIQSVEDDLQQVFGDSQPVRKG
LRLPGCWNMFEAGVCAILSQQATVPAAANPVANLVRELGRSLGDRRWFPAPEAIAESDLA
FLSIPNARRRTLQDFARHFRNHANPDDPQTWSILRGIGPGTVKVAQMRGTSHPDVFLDGD
LGVARGMAQLDQPLEPHAASPWQSYLTLQLWSLQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcgccgaaacctgtcgaaaggcgaggaaatcccgcgatccgcggttcgatggc
aagttcttcatcgcggtgaagaccacggggatctattgccgctcgatctgcccggtcatg
agccccaaagaggaaaacgtacgttactatccctcggccgtggaagccgcgcaggccggc
tttcgaccctgcctgcgatgccgtcccgacagcgcgccgggctcgccggtctggaatggg
gtgaatacgactttggaacgggcgattcggatgattcattcgggatccttgcaggaccaa
cccgtgcccgctgtggctgcgcgattgggggtcagcgatcgctatttgcggcgtctcttc
caaaaacacctgggggtgtcgcccaagacctttgcgctctatcaccaatgtctgttcgcc
aaacagctcctgcaccaaacccatttgcccatccaccaaatcgccctggccagtggattc
aacagtgtccgccgcttcaatgactgctttcagaaccagcttgcattgaccccgacgcag
gtgcgcagatccggggcggttcgatcccaggagcttcggcttcacctgtcctaccgcccg
ccctatgactggacccacatgcggaactttctgcaggcgcgggcgattcccgaaatggaa
tggctcgatgagcgatcttacggtcggaccttttcctggtcgggttgccatgggcacttc
accgccgaatgggcgcgagcggaacacaaatttctcgtgaccatcgagtgcgatgacctg
tctcatttcaagccgatcgtgctcaatatccggcgcctgctcgatctggacgtagacatc
cagtcggtggaagacgacctgcagcaggtcttcggggactcccagccggtgcgcaagggg
ctgcgcttaccgggctgttggaacatgttcgaagcgggggtttgcgccattctgagccag
caggcgaccgtcccggcagccgcaaacccggtggcgaatctggtccgtgagctgggcagg
tcgttgggcgacaggcgttggtttccagcgcccgaagccattgccgaaagcgatctcgcc
tttttgagcatcccgaacgcacgcagacggacgctccaggattttgcgcgacacttccga
aaccacgccaatccggacgatccccaaacctggtcgatcctgcgcggcatcgggcccggg
acggtcaaggtggcgcaaatgcggggcacgagccatccggatgtgtttttggacggcgat
ctcggggtggccaggggaatggcgcaactggaccagccgctcgagccccacgcggcctct
ccatggcaaagctacttaacccttcagttgtggagtttgcaatga
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